Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 MIR4683-201ENST00000579659 81 ntBASIC22.43■■□□□ 1.18
HFM1A2PYH4 AL096828.3-201ENST00000615354 462 ntBASIC22.43■■□□□ 1.18
HFM1A2PYH4 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
HFM1A2PYH4 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
HFM1A2PYH4 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
HFM1A2PYH4 AGAP7P-201ENST00000582299 2062 ntBASIC22.43■■□□□ 1.18
HFM1A2PYH4 AGAP14-201ENST00000624701 2060 ntBASIC22.43■■□□□ 1.18
HFM1A2PYH4 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
HFM1A2PYH4 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
HFM1A2PYH4 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
HFM1A2PYH4 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC22.43■■□□□ 1.18
HFM1A2PYH4 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
HFM1A2PYH4 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
HFM1A2PYH4 AC020907.1-201ENST00000616460 1350 ntBASIC22.43■■□□□ 1.18
HFM1A2PYH4 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
HFM1A2PYH4 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC22.42■■□□□ 1.18
HFM1A2PYH4 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
HFM1A2PYH4 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
HFM1A2PYH4 LINC00528-201ENST00000600723 2160 ntBASIC22.42■■□□□ 1.18
HFM1A2PYH4 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
HFM1A2PYH4 MIR326-201ENST00000362220 95 ntBASIC22.42■■□□□ 1.18
HFM1A2PYH4 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC22.42■■□□□ 1.18
HFM1A2PYH4 MIR663B-201ENST00000408361 115 ntBASIC22.42■■□□□ 1.18
HFM1A2PYH4 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC22.42■■□□□ 1.18
HFM1A2PYH4 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC22.42■■□□□ 1.18
HFM1A2PYH4 AL591846.1-201ENST00000451736 433 ntBASIC22.42■■□□□ 1.18
HFM1A2PYH4 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC22.42■■□□□ 1.18
HFM1A2PYH4 ZNF767P-206ENST00000513792 565 ntBASIC22.42■■□□□ 1.18
HFM1A2PYH4 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC22.42■■□□□ 1.18
HFM1A2PYH4 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC22.42■■□□□ 1.18
HFM1A2PYH4 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
HFM1A2PYH4 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC22.42■■□□□ 1.18
HFM1A2PYH4 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC22.42■■□□□ 1.18
HFM1A2PYH4 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
HFM1A2PYH4 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
HFM1A2PYH4 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
HFM1A2PYH4 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
HFM1A2PYH4 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
HFM1A2PYH4 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
HFM1A2PYH4 FKBP4P6-201ENST00000457486 1332 ntBASIC22.42■■□□□ 1.18
HFM1A2PYH4 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC22.42■■□□□ 1.18
HFM1A2PYH4 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
HFM1A2PYH4 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC22.42■■□□□ 1.18
HFM1A2PYH4 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
HFM1A2PYH4 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC22.42■■□□□ 1.18
HFM1A2PYH4 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
HFM1A2PYH4 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
HFM1A2PYH4 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
HFM1A2PYH4 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC22.42■■□□□ 1.18
HFM1A2PYH4 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
HFM1A2PYH4 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC22.42■■□□□ 1.18
HFM1A2PYH4 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
HFM1A2PYH4 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
HFM1A2PYH4 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC22.41■■□□□ 1.18
HFM1A2PYH4 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC22.41■■□□□ 1.18
HFM1A2PYH4 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
HFM1A2PYH4 ZEB1-AS1-208ENST00000607166 2503 ntBASIC22.41■■□□□ 1.18
HFM1A2PYH4 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
HFM1A2PYH4 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
HFM1A2PYH4 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
HFM1A2PYH4 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
HFM1A2PYH4 AC010141.1-201ENST00000411585 623 ntBASIC22.41■■□□□ 1.18
HFM1A2PYH4 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC22.41■■□□□ 1.18
HFM1A2PYH4 CD74-212ENST00000524315 584 ntTSL 5 BASIC22.41■■□□□ 1.18
HFM1A2PYH4 RNF41-210ENST00000552244 716 ntTSL 3 BASIC22.41■■□□□ 1.18
HFM1A2PYH4 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC22.41■■□□□ 1.18
HFM1A2PYH4 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC22.41■■□□□ 1.18
HFM1A2PYH4 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC22.41■■□□□ 1.18
HFM1A2PYH4 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
HFM1A2PYH4 AC018735.1-201ENST00000437208 1502 ntBASIC22.41■■□□□ 1.18
HFM1A2PYH4 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
HFM1A2PYH4 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
HFM1A2PYH4 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
HFM1A2PYH4 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC22.41■■□□□ 1.18
HFM1A2PYH4 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC22.41■■□□□ 1.18
HFM1A2PYH4 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
HFM1A2PYH4 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC22.41■■□□□ 1.18
HFM1A2PYH4 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC22.41■■□□□ 1.18
HFM1A2PYH4 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC22.41■■□□□ 1.18
HFM1A2PYH4 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC22.41■■□□□ 1.18
HFM1A2PYH4 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC22.41■■□□□ 1.18
HFM1A2PYH4 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
HFM1A2PYH4 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC22.41■■□□□ 1.18
HFM1A2PYH4 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC22.41■■□□□ 1.18
HFM1A2PYH4 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC22.41■■□□□ 1.18
HFM1A2PYH4 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
HFM1A2PYH4 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
HFM1A2PYH4 GCOM2-201ENST00000509133 1104 ntBASIC22.4■■□□□ 1.18
HFM1A2PYH4 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC22.4■■□□□ 1.18
HFM1A2PYH4 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC22.4■■□□□ 1.18
HFM1A2PYH4 KLK11-210ENST00000600362 759 ntTSL 3 BASIC22.4■■□□□ 1.18
HFM1A2PYH4 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
HFM1A2PYH4 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC22.4■■□□□ 1.18
HFM1A2PYH4 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
HFM1A2PYH4 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC22.4■■□□□ 1.18
HFM1A2PYH4 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC22.4■■□□□ 1.18
HFM1A2PYH4 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
HFM1A2PYH4 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
HFM1A2PYH4 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
HFM1A2PYH4 KRT8P4-201ENST00000509735 1454 ntBASIC22.4■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms