Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CSNK1G3Q9Y6M4 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSNK1G3Q9Y6M4 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSNK1G3Q9Y6M4 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSNK1G3Q9Y6M4 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CSNK1G3Q9Y6M4 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSNK1G3Q9Y6M4 CD8B2-202ENST00000417670 633 ntBASIC15.11■□□□□ 0.01
CSNK1G3Q9Y6M4 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC15.11■□□□□ 0.01
CSNK1G3Q9Y6M4 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC15.11■□□□□ 0.01
CSNK1G3Q9Y6M4 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC15.11■□□□□ 0.01
CSNK1G3Q9Y6M4 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CSNK1G3Q9Y6M4 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CSNK1G3Q9Y6M4 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSNK1G3Q9Y6M4 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC15.11■□□□□ 0.01
CSNK1G3Q9Y6M4 RN7SL560P-201ENST00000577943 264 ntBASIC15.11■□□□□ 0.01
CSNK1G3Q9Y6M4 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSNK1G3Q9Y6M4 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSNK1G3Q9Y6M4 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CSNK1G3Q9Y6M4 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSNK1G3Q9Y6M4 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSNK1G3Q9Y6M4 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CSNK1G3Q9Y6M4 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CSNK1G3Q9Y6M4 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
CSNK1G3Q9Y6M4 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.11■□□□□ 0.01
CSNK1G3Q9Y6M4 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CSNK1G3Q9Y6M4 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSNK1G3Q9Y6M4 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CSNK1G3Q9Y6M4 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.1■□□□□ 0.01
CSNK1G3Q9Y6M4 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.1■□□□□ 0.01
CSNK1G3Q9Y6M4 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1G3Q9Y6M4 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1G3Q9Y6M4 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.1■□□□□ 0.01
CSNK1G3Q9Y6M4 AL138709.1-201ENST00000614840 1693 ntBASIC15.1■□□□□ 0.01
CSNK1G3Q9Y6M4 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.1■□□□□ 0.01
CSNK1G3Q9Y6M4 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CSNK1G3Q9Y6M4 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1G3Q9Y6M4 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CSNK1G3Q9Y6M4 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1G3Q9Y6M4 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1G3Q9Y6M4 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC15.1■□□□□ 0.01
CSNK1G3Q9Y6M4 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
CSNK1G3Q9Y6M4 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1G3Q9Y6M4 ACTBP8-201ENST00000403258 1108 ntBASIC15.1■□□□□ 0.01
CSNK1G3Q9Y6M4 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1G3Q9Y6M4 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1G3Q9Y6M4 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.1■□□□□ 0.01
CSNK1G3Q9Y6M4 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC15.1■□□□□ 0.01
CSNK1G3Q9Y6M4 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1G3Q9Y6M4 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC15.1■□□□□ 0.01
CSNK1G3Q9Y6M4 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.1■□□□□ 0.01
CSNK1G3Q9Y6M4 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.1■□□□□ 0.01
CSNK1G3Q9Y6M4 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC15.1■□□□□ 0.01
CSNK1G3Q9Y6M4 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC15.1■□□□□ 0.01
CSNK1G3Q9Y6M4 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.1■□□□□ 0.01
CSNK1G3Q9Y6M4 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1G3Q9Y6M4 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1G3Q9Y6M4 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1G3Q9Y6M4 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
CSNK1G3Q9Y6M4 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1G3Q9Y6M4 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1G3Q9Y6M4 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1G3Q9Y6M4 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1G3Q9Y6M4 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.1■□□□□ 0.01
CSNK1G3Q9Y6M4 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1G3Q9Y6M4 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1G3Q9Y6M4 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSNK1G3Q9Y6M4 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CSNK1G3Q9Y6M4 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSNK1G3Q9Y6M4 AC010491.1-201ENST00000563101 2797 ntBASIC15.09■□□□□ 0.01
CSNK1G3Q9Y6M4 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.09■□□□□ 0.01
CSNK1G3Q9Y6M4 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.09■□□□□ 0.01
CSNK1G3Q9Y6M4 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSNK1G3Q9Y6M4 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CSNK1G3Q9Y6M4 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSNK1G3Q9Y6M4 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC15.09■□□□□ 0.01
CSNK1G3Q9Y6M4 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSNK1G3Q9Y6M4 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSNK1G3Q9Y6M4 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSNK1G3Q9Y6M4 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSNK1G3Q9Y6M4 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSNK1G3Q9Y6M4 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSNK1G3Q9Y6M4 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.09■□□□□ 0.01
CSNK1G3Q9Y6M4 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSNK1G3Q9Y6M4 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSNK1G3Q9Y6M4 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CSNK1G3Q9Y6M4 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSNK1G3Q9Y6M4 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSNK1G3Q9Y6M4 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
CSNK1G3Q9Y6M4 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSNK1G3Q9Y6M4 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.09■□□□□ 0.01
CSNK1G3Q9Y6M4 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CSNK1G3Q9Y6M4 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC15.09■□□□□ 0.01
CSNK1G3Q9Y6M4 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CSNK1G3Q9Y6M4 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC15.09■□□□□ 0.01
CSNK1G3Q9Y6M4 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSNK1G3Q9Y6M4 RPL13AP20-201ENST00000459725 609 ntBASIC15.09■□□□□ 0.01
CSNK1G3Q9Y6M4 AC108725.1-201ENST00000495472 409 ntBASIC15.09■□□□□ 0.01
CSNK1G3Q9Y6M4 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CSNK1G3Q9Y6M4 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSNK1G3Q9Y6M4 RNA5SP486-201ENST00000515961 83 ntBASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms