Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
ATG4BQ9Y4P1 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ATG4BQ9Y4P1 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.62□□□□□ -0.07
ATG4BQ9Y4P1 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
ATG4BQ9Y4P1 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ATG4BQ9Y4P1 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ATG4BQ9Y4P1 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ATG4BQ9Y4P1 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ATG4BQ9Y4P1 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
ATG4BQ9Y4P1 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ATG4BQ9Y4P1 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ATG4BQ9Y4P1 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ATG4BQ9Y4P1 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.61□□□□□ -0.07
ATG4BQ9Y4P1 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ATG4BQ9Y4P1 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
ATG4BQ9Y4P1 AGAP7P-201ENST00000582299 2062 ntBASIC14.61□□□□□ -0.07
ATG4BQ9Y4P1 AGAP14-201ENST00000624701 2060 ntBASIC14.61□□□□□ -0.07
ATG4BQ9Y4P1 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
ATG4BQ9Y4P1 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ATG4BQ9Y4P1 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.61□□□□□ -0.07
ATG4BQ9Y4P1 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ATG4BQ9Y4P1 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ATG4BQ9Y4P1 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ATG4BQ9Y4P1 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.61□□□□□ -0.07
ATG4BQ9Y4P1 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ATG4BQ9Y4P1 PIN1P1-201ENST00000412108 996 ntBASIC14.61□□□□□ -0.07
ATG4BQ9Y4P1 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.61□□□□□ -0.07
ATG4BQ9Y4P1 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.61□□□□□ -0.07
ATG4BQ9Y4P1 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.61□□□□□ -0.07
ATG4BQ9Y4P1 GAPDHP40-201ENST00000505218 1006 ntBASIC14.61□□□□□ -0.07
ATG4BQ9Y4P1 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.61□□□□□ -0.07
ATG4BQ9Y4P1 AC190387.1-201ENST00000551683 408 ntBASIC14.61□□□□□ -0.07
ATG4BQ9Y4P1 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.61□□□□□ -0.07
ATG4BQ9Y4P1 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.61□□□□□ -0.07
ATG4BQ9Y4P1 AL049840.4-201ENST00000602422 811 ntBASIC14.61□□□□□ -0.07
ATG4BQ9Y4P1 CHCHD2P3-201ENST00000603038 451 ntBASIC14.61□□□□□ -0.07
ATG4BQ9Y4P1 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.61□□□□□ -0.07
ATG4BQ9Y4P1 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.61□□□□□ -0.07
ATG4BQ9Y4P1 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.61□□□□□ -0.07
ATG4BQ9Y4P1 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.61□□□□□ -0.07
ATG4BQ9Y4P1 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.61□□□□□ -0.07
ATG4BQ9Y4P1 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ATG4BQ9Y4P1 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
ATG4BQ9Y4P1 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
ATG4BQ9Y4P1 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ATG4BQ9Y4P1 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ATG4BQ9Y4P1 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ATG4BQ9Y4P1 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ATG4BQ9Y4P1 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
ATG4BQ9Y4P1 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ATG4BQ9Y4P1 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.61□□□□□ -0.07
ATG4BQ9Y4P1 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
ATG4BQ9Y4P1 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
ATG4BQ9Y4P1 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.61□□□□□ -0.07
ATG4BQ9Y4P1 AC006058.4-201ENST00000624016 1670 ntBASIC14.61□□□□□ -0.07
ATG4BQ9Y4P1 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ATG4BQ9Y4P1 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.61□□□□□ -0.07
ATG4BQ9Y4P1 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
ATG4BQ9Y4P1 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
ATG4BQ9Y4P1 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
ATG4BQ9Y4P1 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ATG4BQ9Y4P1 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
ATG4BQ9Y4P1 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ATG4BQ9Y4P1 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ATG4BQ9Y4P1 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ATG4BQ9Y4P1 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
ATG4BQ9Y4P1 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ATG4BQ9Y4P1 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
ATG4BQ9Y4P1 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ATG4BQ9Y4P1 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ATG4BQ9Y4P1 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
ATG4BQ9Y4P1 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ATG4BQ9Y4P1 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ATG4BQ9Y4P1 TNRC18P2-201ENST00000417666 2714 ntBASIC14.6□□□□□ -0.07
ATG4BQ9Y4P1 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
ATG4BQ9Y4P1 DRD5P1-201ENST00000456605 1438 ntBASIC14.6□□□□□ -0.07
ATG4BQ9Y4P1 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.6□□□□□ -0.07
ATG4BQ9Y4P1 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
ATG4BQ9Y4P1 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
ATG4BQ9Y4P1 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.6□□□□□ -0.07
ATG4BQ9Y4P1 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.6□□□□□ -0.07
ATG4BQ9Y4P1 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.6□□□□□ -0.07
ATG4BQ9Y4P1 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ATG4BQ9Y4P1 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
ATG4BQ9Y4P1 VDAC1P7-201ENST00000462417 847 ntBASIC14.6□□□□□ -0.07
ATG4BQ9Y4P1 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.6□□□□□ -0.07
ATG4BQ9Y4P1 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.6□□□□□ -0.07
ATG4BQ9Y4P1 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.6□□□□□ -0.07
ATG4BQ9Y4P1 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.6□□□□□ -0.07
ATG4BQ9Y4P1 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
ATG4BQ9Y4P1 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.6□□□□□ -0.07
ATG4BQ9Y4P1 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ATG4BQ9Y4P1 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
ATG4BQ9Y4P1 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ATG4BQ9Y4P1 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ATG4BQ9Y4P1 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.6□□□□□ -0.07
ATG4BQ9Y4P1 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.6□□□□□ -0.07
ATG4BQ9Y4P1 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ATG4BQ9Y4P1 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ATG4BQ9Y4P1 AC103702.1-201ENST00000548801 2630 ntBASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms