Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC18.73■□□□□ 0.59
HMG20BQ9P0W2 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC18.73■□□□□ 0.59
HMG20BQ9P0W2 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HMG20BQ9P0W2 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
HMG20BQ9P0W2 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HMG20BQ9P0W2 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HMG20BQ9P0W2 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HMG20BQ9P0W2 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HMG20BQ9P0W2 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC18.73■□□□□ 0.59
HMG20BQ9P0W2 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
HMG20BQ9P0W2 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HMG20BQ9P0W2 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
HMG20BQ9P0W2 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HMG20BQ9P0W2 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
HMG20BQ9P0W2 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMG20BQ9P0W2 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMG20BQ9P0W2 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMG20BQ9P0W2 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMG20BQ9P0W2 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMG20BQ9P0W2 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC18.72■□□□□ 0.59
HMG20BQ9P0W2 PGR-210ENST00000619228 3038 ntTSL 5 BASIC18.72■□□□□ 0.59
HMG20BQ9P0W2 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMG20BQ9P0W2 KRT8P44-201ENST00000441609 1350 ntBASIC18.72■□□□□ 0.59
HMG20BQ9P0W2 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC18.72■□□□□ 0.59
HMG20BQ9P0W2 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMG20BQ9P0W2 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HMG20BQ9P0W2 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMG20BQ9P0W2 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
HMG20BQ9P0W2 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMG20BQ9P0W2 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMG20BQ9P0W2 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC18.72■□□□□ 0.59
HMG20BQ9P0W2 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
HMG20BQ9P0W2 RPL5P21-201ENST00000404620 815 ntBASIC18.72■□□□□ 0.59
HMG20BQ9P0W2 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC18.72■□□□□ 0.59
HMG20BQ9P0W2 KRT223P-202ENST00000449164 1292 ntBASIC18.72■□□□□ 0.59
HMG20BQ9P0W2 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC18.72■□□□□ 0.59
HMG20BQ9P0W2 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
HMG20BQ9P0W2 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
HMG20BQ9P0W2 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC18.72■□□□□ 0.59
HMG20BQ9P0W2 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC18.72■□□□□ 0.59
HMG20BQ9P0W2 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC18.72■□□□□ 0.59
HMG20BQ9P0W2 Six3os1_5.1-201ENST00000611000 271 ntBASIC18.72■□□□□ 0.59
HMG20BQ9P0W2 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC18.72■□□□□ 0.59
HMG20BQ9P0W2 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC18.72■□□□□ 0.59
HMG20BQ9P0W2 AC126365.1-201ENST00000578585 1514 ntBASIC18.72■□□□□ 0.59
HMG20BQ9P0W2 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMG20BQ9P0W2 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HMG20BQ9P0W2 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMG20BQ9P0W2 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMG20BQ9P0W2 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HMG20BQ9P0W2 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC18.72■□□□□ 0.59
HMG20BQ9P0W2 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC18.72■□□□□ 0.59
HMG20BQ9P0W2 HYMAI-201ENST00000635591 3347 ntBASIC18.72■□□□□ 0.59
HMG20BQ9P0W2 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC18.72■□□□□ 0.59
HMG20BQ9P0W2 AC007787.1-201ENST00000588095 1583 ntBASIC18.72■□□□□ 0.59
HMG20BQ9P0W2 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMG20BQ9P0W2 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMG20BQ9P0W2 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMG20BQ9P0W2 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
HMG20BQ9P0W2 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC18.71■□□□□ 0.59
HMG20BQ9P0W2 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
HMG20BQ9P0W2 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HMG20BQ9P0W2 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HMG20BQ9P0W2 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HMG20BQ9P0W2 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
HMG20BQ9P0W2 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC18.71■□□□□ 0.59
HMG20BQ9P0W2 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
HMG20BQ9P0W2 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC18.71■□□□□ 0.59
HMG20BQ9P0W2 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
HMG20BQ9P0W2 RNU1-114P-201ENST00000365297 166 ntBASIC18.71■□□□□ 0.59
HMG20BQ9P0W2 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC18.71■□□□□ 0.59
HMG20BQ9P0W2 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HMG20BQ9P0W2 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC18.71■□□□□ 0.59
HMG20BQ9P0W2 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC18.71■□□□□ 0.59
HMG20BQ9P0W2 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC18.71■□□□□ 0.59
HMG20BQ9P0W2 RPS2P32-201ENST00000439199 892 ntBASIC18.71■□□□□ 0.59
HMG20BQ9P0W2 KLF2P4-201ENST00000451959 1225 ntBASIC18.71■□□□□ 0.59
HMG20BQ9P0W2 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC18.71■□□□□ 0.59
HMG20BQ9P0W2 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC18.71■□□□□ 0.59
HMG20BQ9P0W2 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC18.71■□□□□ 0.59
HMG20BQ9P0W2 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC18.71■□□□□ 0.59
HMG20BQ9P0W2 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC18.71■□□□□ 0.59
HMG20BQ9P0W2 AC133552.6-201ENST00000613406 534 ntBASIC18.71■□□□□ 0.59
HMG20BQ9P0W2 PRSS30P-206ENST00000641773 873 ntBASIC18.71■□□□□ 0.59
HMG20BQ9P0W2 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HMG20BQ9P0W2 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HMG20BQ9P0W2 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC18.71■□□□□ 0.59
HMG20BQ9P0W2 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
HMG20BQ9P0W2 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
HMG20BQ9P0W2 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC18.71■□□□□ 0.59
HMG20BQ9P0W2 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
HMG20BQ9P0W2 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC18.71■□□□□ 0.59
HMG20BQ9P0W2 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC18.71■□□□□ 0.59
HMG20BQ9P0W2 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HMG20BQ9P0W2 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HMG20BQ9P0W2 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
HMG20BQ9P0W2 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC18.7■□□□□ 0.58
HMG20BQ9P0W2 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC18.7■□□□□ 0.58
HMG20BQ9P0W2 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC18.7■□□□□ 0.58
HMG20BQ9P0W2 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms