Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CUEDC1Q9NWM3 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CUEDC1Q9NWM3 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CUEDC1Q9NWM3 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CUEDC1Q9NWM3 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CUEDC1Q9NWM3 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.98□□□□□ -0.01
CUEDC1Q9NWM3 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.98□□□□□ -0.01
CUEDC1Q9NWM3 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.98□□□□□ -0.01
CUEDC1Q9NWM3 AC098850.1-201ENST00000419919 790 ntBASIC14.98□□□□□ -0.01
CUEDC1Q9NWM3 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
CUEDC1Q9NWM3 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
CUEDC1Q9NWM3 RN7SL399P-201ENST00000471648 279 ntBASIC14.98□□□□□ -0.01
CUEDC1Q9NWM3 FAM86LP-201ENST00000478302 853 ntBASIC14.98□□□□□ -0.01
CUEDC1Q9NWM3 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CUEDC1Q9NWM3 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CUEDC1Q9NWM3 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.98□□□□□ -0.01
CUEDC1Q9NWM3 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC14.98□□□□□ -0.01
CUEDC1Q9NWM3 API5-211ENST00000534695 560 ntTSL 5 BASIC14.98□□□□□ -0.01
CUEDC1Q9NWM3 NOP2-211ENST00000540228 668 ntTSL 2 BASIC14.98□□□□□ -0.01
CUEDC1Q9NWM3 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.98□□□□□ -0.01
CUEDC1Q9NWM3 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.98□□□□□ -0.01
CUEDC1Q9NWM3 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.98□□□□□ -0.01
CUEDC1Q9NWM3 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.98□□□□□ -0.01
CUEDC1Q9NWM3 Six3os1_5.1-201ENST00000611000 271 ntBASIC14.98□□□□□ -0.01
CUEDC1Q9NWM3 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.98□□□□□ -0.01
CUEDC1Q9NWM3 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC14.98□□□□□ -0.01
CUEDC1Q9NWM3 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.98□□□□□ -0.01
CUEDC1Q9NWM3 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.98□□□□□ -0.01
CUEDC1Q9NWM3 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CUEDC1Q9NWM3 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
CUEDC1Q9NWM3 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CUEDC1Q9NWM3 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CUEDC1Q9NWM3 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CUEDC1Q9NWM3 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CUEDC1Q9NWM3 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CUEDC1Q9NWM3 AC144831.1-201ENST00000573312 2656 ntBASIC14.98□□□□□ -0.01
CUEDC1Q9NWM3 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CUEDC1Q9NWM3 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CUEDC1Q9NWM3 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CUEDC1Q9NWM3 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CUEDC1Q9NWM3 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.97□□□□□ -0.01
CUEDC1Q9NWM3 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.97□□□□□ -0.01
CUEDC1Q9NWM3 AC138035.3-201ENST00000622706 2791 ntBASIC14.97□□□□□ -0.01
CUEDC1Q9NWM3 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CUEDC1Q9NWM3 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CUEDC1Q9NWM3 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CUEDC1Q9NWM3 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.97□□□□□ -0.01
CUEDC1Q9NWM3 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CUEDC1Q9NWM3 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CUEDC1Q9NWM3 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CUEDC1Q9NWM3 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CUEDC1Q9NWM3 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CUEDC1Q9NWM3 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.97□□□□□ -0.01
CUEDC1Q9NWM3 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
CUEDC1Q9NWM3 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.97□□□□□ -0.01
CUEDC1Q9NWM3 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CUEDC1Q9NWM3 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CUEDC1Q9NWM3 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CUEDC1Q9NWM3 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CUEDC1Q9NWM3 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC14.97□□□□□ -0.01
CUEDC1Q9NWM3 MEP1AP4-201ENST00000423244 1087 ntBASIC14.97□□□□□ -0.01
CUEDC1Q9NWM3 AC011495.1-201ENST00000498085 584 ntBASIC14.97□□□□□ -0.01
CUEDC1Q9NWM3 AC124312.2-201ENST00000546615 427 ntTSL 3 BASIC14.97□□□□□ -0.01
CUEDC1Q9NWM3 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.97□□□□□ -0.01
CUEDC1Q9NWM3 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.97□□□□□ -0.01
CUEDC1Q9NWM3 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CUEDC1Q9NWM3 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.97□□□□□ -0.01
CUEDC1Q9NWM3 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.97□□□□□ -0.01
CUEDC1Q9NWM3 AC025181.2-201ENST00000606994 802 ntBASIC14.97□□□□□ -0.01
CUEDC1Q9NWM3 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.97□□□□□ -0.01
CUEDC1Q9NWM3 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.97□□□□□ -0.01
CUEDC1Q9NWM3 AP001002.2-201ENST00000625137 386 ntBASIC14.97□□□□□ -0.01
CUEDC1Q9NWM3 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CUEDC1Q9NWM3 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.97□□□□□ -0.01
CUEDC1Q9NWM3 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.97□□□□□ -0.01
CUEDC1Q9NWM3 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.97□□□□□ -0.01
CUEDC1Q9NWM3 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CUEDC1Q9NWM3 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
CUEDC1Q9NWM3 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CUEDC1Q9NWM3 AC126177.1-201ENST00000547829 2218 ntBASIC14.97□□□□□ -0.01
CUEDC1Q9NWM3 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CUEDC1Q9NWM3 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CUEDC1Q9NWM3 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CUEDC1Q9NWM3 AC022532.1-201ENST00000624563 1728 ntBASIC14.97□□□□□ -0.01
CUEDC1Q9NWM3 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CUEDC1Q9NWM3 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CUEDC1Q9NWM3 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.97□□□□□ -0.01
CUEDC1Q9NWM3 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.97□□□□□ -0.01
CUEDC1Q9NWM3 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
CUEDC1Q9NWM3 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CUEDC1Q9NWM3 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CUEDC1Q9NWM3 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CUEDC1Q9NWM3 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.97□□□□□ -0.01
CUEDC1Q9NWM3 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CUEDC1Q9NWM3 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CUEDC1Q9NWM3 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CUEDC1Q9NWM3 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CUEDC1Q9NWM3 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CUEDC1Q9NWM3 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.96□□□□□ -0.01
CUEDC1Q9NWM3 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms