Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
PTPN18Q99952 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC17.37■□□□□ 0.37
PTPN18Q99952 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PTPN18Q99952 AC012441.2-201ENST00000444843 739 ntBASIC17.37■□□□□ 0.37
PTPN18Q99952 PFN2-206ENST00000461930 606 ntTSL 4 BASIC17.37■□□□□ 0.37
PTPN18Q99952 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC17.37■□□□□ 0.37
PTPN18Q99952 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC17.37■□□□□ 0.37
PTPN18Q99952 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC17.37■□□□□ 0.37
PTPN18Q99952 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
PTPN18Q99952 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC17.37■□□□□ 0.37
PTPN18Q99952 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PTPN18Q99952 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC17.37■□□□□ 0.37
PTPN18Q99952 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
PTPN18Q99952 AL109837.1-201ENST00000603272 613 ntBASIC17.37■□□□□ 0.37
PTPN18Q99952 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTPN18Q99952 Z98259.2-201ENST00000641583 609 ntBASIC17.37■□□□□ 0.37
PTPN18Q99952 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
PTPN18Q99952 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTPN18Q99952 AL360270.3-201ENST00000609118 1348 ntBASIC17.37■□□□□ 0.37
PTPN18Q99952 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTPN18Q99952 AC020916.1-201ENST00000587762 1774 ntBASIC17.37■□□□□ 0.37
PTPN18Q99952 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
PTPN18Q99952 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTPN18Q99952 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
PTPN18Q99952 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTPN18Q99952 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTPN18Q99952 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PTPN18Q99952 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PTPN18Q99952 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
PTPN18Q99952 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.37■□□□□ 0.37
PTPN18Q99952 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
PTPN18Q99952 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTPN18Q99952 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC17.37■□□□□ 0.37
PTPN18Q99952 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTPN18Q99952 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTPN18Q99952 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTPN18Q99952 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17.37■□□□□ 0.37
PTPN18Q99952 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTPN18Q99952 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PTPN18Q99952 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTPN18Q99952 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
PTPN18Q99952 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
PTPN18Q99952 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC17.36■□□□□ 0.37
PTPN18Q99952 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTPN18Q99952 AC025271.4-201ENST00000621477 1726 ntBASIC17.36■□□□□ 0.37
PTPN18Q99952 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
PTPN18Q99952 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
PTPN18Q99952 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTPN18Q99952 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
PTPN18Q99952 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTPN18Q99952 RBM38-204ENST00000371219 760 ntTSL 2 BASIC17.36■□□□□ 0.37
PTPN18Q99952 AP000356.3-201ENST00000382243 753 ntBASIC17.36■□□□□ 0.37
PTPN18Q99952 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTPN18Q99952 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC17.36■□□□□ 0.37
PTPN18Q99952 RPL8P2-201ENST00000430538 502 ntBASIC17.36■□□□□ 0.37
PTPN18Q99952 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC17.36■□□□□ 0.37
PTPN18Q99952 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC17.36■□□□□ 0.37
PTPN18Q99952 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
PTPN18Q99952 AC141586.1-203ENST00000567242 366 ntBASIC17.36■□□□□ 0.37
PTPN18Q99952 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
PTPN18Q99952 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
PTPN18Q99952 AC127024.7-201ENST00000625101 200 ntBASIC17.36■□□□□ 0.37
PTPN18Q99952 TNRC18P3-201ENST00000441896 2691 ntBASIC17.36■□□□□ 0.37
PTPN18Q99952 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTPN18Q99952 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
PTPN18Q99952 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC17.36■□□□□ 0.37
PTPN18Q99952 LINC02447-202ENST00000501888 2146 ntBASIC17.36■□□□□ 0.37
PTPN18Q99952 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTPN18Q99952 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTPN18Q99952 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTPN18Q99952 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.36■□□□□ 0.37
PTPN18Q99952 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PTPN18Q99952 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTPN18Q99952 AL662844.4-201ENST00000606367 2838 ntBASIC17.35■□□□□ 0.37
PTPN18Q99952 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTPN18Q99952 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
PTPN18Q99952 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC17.35■□□□□ 0.37
PTPN18Q99952 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
PTPN18Q99952 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTPN18Q99952 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTPN18Q99952 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTPN18Q99952 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTPN18Q99952 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTPN18Q99952 RN7SKP230-201ENST00000365642 335 ntBASIC17.35■□□□□ 0.37
PTPN18Q99952 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC17.35■□□□□ 0.37
PTPN18Q99952 NAGK-204ENST00000443872 878 ntTSL 3 BASIC17.35■□□□□ 0.37
PTPN18Q99952 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PTPN18Q99952 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PTPN18Q99952 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC17.35■□□□□ 0.37
PTPN18Q99952 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC17.35■□□□□ 0.37
PTPN18Q99952 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC17.35■□□□□ 0.37
PTPN18Q99952 MIR3677-201ENST00000578964 60 ntBASIC17.35■□□□□ 0.37
PTPN18Q99952 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC17.35■□□□□ 0.37
PTPN18Q99952 AC005962.1-201ENST00000584100 773 ntBASIC17.35■□□□□ 0.37
PTPN18Q99952 RPL17P45-201ENST00000586289 509 ntBASIC17.35■□□□□ 0.37
PTPN18Q99952 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC17.35■□□□□ 0.37
PTPN18Q99952 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC17.35■□□□□ 0.37
PTPN18Q99952 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC17.35■□□□□ 0.37
PTPN18Q99952 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC17.35■□□□□ 0.37
PTPN18Q99952 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms