Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 FKBP4P6-201ENST00000457486 1332 ntBASIC16.3■□□□□ 0.2
RAD9AQ99638 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RAD9AQ99638 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAD9AQ99638 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC16.3■□□□□ 0.2
RAD9AQ99638 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC16.3■□□□□ 0.2
RAD9AQ99638 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RAD9AQ99638 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC16.3■□□□□ 0.2
RAD9AQ99638 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.3■□□□□ 0.2
RAD9AQ99638 PCBP2-OT1-201ENST00000634357 590 ntBASIC16.3■□□□□ 0.2
RAD9AQ99638 AC006453.1-201ENST00000636037 1257 ntBASIC16.3■□□□□ 0.2
RAD9AQ99638 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAD9AQ99638 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.3■□□□□ 0.2
RAD9AQ99638 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAD9AQ99638 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RAD9AQ99638 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAD9AQ99638 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAD9AQ99638 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAD9AQ99638 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAD9AQ99638 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.3■□□□□ 0.2
RAD9AQ99638 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAD9AQ99638 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.3■□□□□ 0.2
RAD9AQ99638 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.3■□□□□ 0.2
RAD9AQ99638 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAD9AQ99638 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAD9AQ99638 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC16.29■□□□□ 0.2
RAD9AQ99638 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RAD9AQ99638 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RAD9AQ99638 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAD9AQ99638 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RAD9AQ99638 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RAD9AQ99638 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAD9AQ99638 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAD9AQ99638 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC16.29■□□□□ 0.2
RAD9AQ99638 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAD9AQ99638 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.29■□□□□ 0.2
RAD9AQ99638 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAD9AQ99638 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
RAD9AQ99638 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAD9AQ99638 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAD9AQ99638 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAD9AQ99638 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAD9AQ99638 RN7SKP214-201ENST00000364208 315 ntBASIC16.29■□□□□ 0.2
RAD9AQ99638 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAD9AQ99638 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAD9AQ99638 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAD9AQ99638 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
RAD9AQ99638 AC026316.1-201ENST00000398900 414 ntBASIC16.29■□□□□ 0.2
RAD9AQ99638 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC16.29■□□□□ 0.2
RAD9AQ99638 CEP164P1-201ENST00000455142 418 ntBASIC16.29■□□□□ 0.2
RAD9AQ99638 AC019193.1-201ENST00000506678 823 ntBASIC16.29■□□□□ 0.2
RAD9AQ99638 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RAD9AQ99638 HNRNPA1P36-201ENST00000521313 955 ntBASIC16.29■□□□□ 0.2
RAD9AQ99638 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
RAD9AQ99638 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
RAD9AQ99638 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC16.29■□□□□ 0.2
RAD9AQ99638 DUX4L47-201ENST00000566374 394 ntBASIC16.29■□□□□ 0.2
RAD9AQ99638 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC16.29■□□□□ 0.2
RAD9AQ99638 MIR4683-201ENST00000579659 81 ntBASIC16.29■□□□□ 0.2
RAD9AQ99638 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAD9AQ99638 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAD9AQ99638 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC16.29■□□□□ 0.2
RAD9AQ99638 AC004466.1-201ENST00000599515 1080 ntBASIC16.29■□□□□ 0.2
RAD9AQ99638 AC012044.1-201ENST00000603431 297 ntBASIC16.29■□□□□ 0.2
RAD9AQ99638 AC073352.2-201ENST00000609385 439 ntBASIC16.29■□□□□ 0.2
RAD9AQ99638 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.29■□□□□ 0.2
RAD9AQ99638 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAD9AQ99638 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAD9AQ99638 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAD9AQ99638 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAD9AQ99638 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAD9AQ99638 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
RAD9AQ99638 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.28■□□□□ 0.2
RAD9AQ99638 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC16.28■□□□□ 0.2
RAD9AQ99638 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAD9AQ99638 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
RAD9AQ99638 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC16.28■□□□□ 0.2
RAD9AQ99638 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC16.28■□□□□ 0.2
RAD9AQ99638 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAD9AQ99638 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAD9AQ99638 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAD9AQ99638 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAD9AQ99638 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAD9AQ99638 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAD9AQ99638 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC16.28■□□□□ 0.2
RAD9AQ99638 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAD9AQ99638 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
RAD9AQ99638 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAD9AQ99638 AL596087.1-201ENST00000400979 1969 ntBASIC16.28■□□□□ 0.2
RAD9AQ99638 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAD9AQ99638 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
RAD9AQ99638 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAD9AQ99638 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC16.28■□□□□ 0.2
RAD9AQ99638 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC16.28■□□□□ 0.2
RAD9AQ99638 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC16.28■□□□□ 0.2
RAD9AQ99638 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC16.28■□□□□ 0.2
RAD9AQ99638 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC16.28■□□□□ 0.2
RAD9AQ99638 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAD9AQ99638 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC16.28■□□□□ 0.2
RAD9AQ99638 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC16.28■□□□□ 0.2
RAD9AQ99638 AC103988.2-201ENST00000561804 725 ntBASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms