Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
TRIM47Q96LD4 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC18.06■□□□□ 0.48
TRIM47Q96LD4 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC18.06■□□□□ 0.48
TRIM47Q96LD4 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC18.06■□□□□ 0.48
TRIM47Q96LD4 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC18.06■□□□□ 0.48
TRIM47Q96LD4 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM47Q96LD4 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM47Q96LD4 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC18.06■□□□□ 0.48
TRIM47Q96LD4 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC18.06■□□□□ 0.48
TRIM47Q96LD4 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM47Q96LD4 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM47Q96LD4 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM47Q96LD4 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM47Q96LD4 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC18.06■□□□□ 0.48
TRIM47Q96LD4 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM47Q96LD4 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
TRIM47Q96LD4 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM47Q96LD4 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM47Q96LD4 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM47Q96LD4 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
TRIM47Q96LD4 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM47Q96LD4 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM47Q96LD4 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM47Q96LD4 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM47Q96LD4 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM47Q96LD4 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM47Q96LD4 GRN-222ENST00000639447 1314 ntTSL 2 BASIC18.05■□□□□ 0.48
TRIM47Q96LD4 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM47Q96LD4 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
TRIM47Q96LD4 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC18.05■□□□□ 0.48
TRIM47Q96LD4 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM47Q96LD4 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM47Q96LD4 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM47Q96LD4 AC006001.1-201ENST00000325130 474 ntBASIC18.05■□□□□ 0.48
TRIM47Q96LD4 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM47Q96LD4 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC18.05■□□□□ 0.48
TRIM47Q96LD4 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC18.05■□□□□ 0.48
TRIM47Q96LD4 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC18.05■□□□□ 0.48
TRIM47Q96LD4 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM47Q96LD4 AC105129.2-201ENST00000559536 390 ntBASIC18.05■□□□□ 0.48
TRIM47Q96LD4 MIR4741-201ENST00000579822 90 ntBASIC18.05■□□□□ 0.48
TRIM47Q96LD4 AC005695.3-201ENST00000614522 232 ntBASIC18.05■□□□□ 0.48
TRIM47Q96LD4 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC18.05■□□□□ 0.48
TRIM47Q96LD4 AC015967.2-201ENST00000624092 234 ntBASIC18.05■□□□□ 0.48
TRIM47Q96LD4 AC006435.4-201ENST00000625037 234 ntBASIC18.05■□□□□ 0.48
TRIM47Q96LD4 AL356737.1-201ENST00000634391 234 ntBASIC18.05■□□□□ 0.48
TRIM47Q96LD4 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
TRIM47Q96LD4 MYB-242ENST00000618728 3545 ntTSL 5 BASIC18.05■□□□□ 0.48
TRIM47Q96LD4 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
TRIM47Q96LD4 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM47Q96LD4 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
TRIM47Q96LD4 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
TRIM47Q96LD4 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
TRIM47Q96LD4 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM47Q96LD4 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM47Q96LD4 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
TRIM47Q96LD4 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC18.05■□□□□ 0.48
TRIM47Q96LD4 MBP-202ENST00000355994 2772 ntTSL 5 BASIC18.05■□□□□ 0.48
TRIM47Q96LD4 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC18.05■□□□□ 0.48
TRIM47Q96LD4 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
TRIM47Q96LD4 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
TRIM47Q96LD4 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM47Q96LD4 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
TRIM47Q96LD4 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM47Q96LD4 FLJ16779-201ENST00000612722 7638 ntBASIC18.05■□□□□ 0.48
TRIM47Q96LD4 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM47Q96LD4 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
TRIM47Q96LD4 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM47Q96LD4 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM47Q96LD4 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM47Q96LD4 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM47Q96LD4 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM47Q96LD4 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM47Q96LD4 AGER-206ENST00000375070 1463 ntTSL 5 BASIC18.04■□□□□ 0.48
TRIM47Q96LD4 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM47Q96LD4 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
TRIM47Q96LD4 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM47Q96LD4 ACKR1-201ENST00000368121 1240 ntBASIC18.04■□□□□ 0.48
TRIM47Q96LD4 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM47Q96LD4 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM47Q96LD4 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
TRIM47Q96LD4 BTBD6P1-201ENST00000412176 1267 ntBASIC18.04■□□□□ 0.48
TRIM47Q96LD4 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC18.04■□□□□ 0.48
TRIM47Q96LD4 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC18.04■□□□□ 0.48
TRIM47Q96LD4 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC18.04■□□□□ 0.48
TRIM47Q96LD4 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
TRIM47Q96LD4 HNRNPA1P48-202ENST00000565308 961 ntBASIC18.04■□□□□ 0.48
TRIM47Q96LD4 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC18.04■□□□□ 0.48
TRIM47Q96LD4 KC6-205ENST00000599934 556 ntTSL 4 BASIC18.04■□□□□ 0.48
TRIM47Q96LD4 MYB-201ENST00000316528 3571 ntTSL 5 BASIC18.04■□□□□ 0.48
TRIM47Q96LD4 MYB-241ENST00000616088 3573 ntTSL 5 BASIC18.04■□□□□ 0.48
TRIM47Q96LD4 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM47Q96LD4 HLA-DQB2-231ENST00000435145 2026 ntBASIC18.04■□□□□ 0.48
TRIM47Q96LD4 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM47Q96LD4 HARS-202ENST00000415192 1401 ntTSL 2 BASIC18.04■□□□□ 0.48
TRIM47Q96LD4 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
TRIM47Q96LD4 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM47Q96LD4 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
TRIM47Q96LD4 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC18.04■□□□□ 0.48
TRIM47Q96LD4 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms