Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM43Q96BQ3 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
TRIM43Q96BQ3 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TRIM43Q96BQ3 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM43Q96BQ3 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM43Q96BQ3 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM43Q96BQ3 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
TRIM43Q96BQ3 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC16.49■□□□□ 0.23
TRIM43Q96BQ3 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM43Q96BQ3 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM43Q96BQ3 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.49■□□□□ 0.23
TRIM43Q96BQ3 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC16.49■□□□□ 0.23
TRIM43Q96BQ3 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM43Q96BQ3 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM43Q96BQ3 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM43Q96BQ3 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
TRIM43Q96BQ3 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
TRIM43Q96BQ3 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC16.49■□□□□ 0.23
TRIM43Q96BQ3 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM43Q96BQ3 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
TRIM43Q96BQ3 RPL8P2-201ENST00000430538 502 ntBASIC16.49■□□□□ 0.23
TRIM43Q96BQ3 PIN4P1-201ENST00000451079 396 ntBASIC16.49■□□□□ 0.23
TRIM43Q96BQ3 AC079112.1-201ENST00000454972 939 ntBASIC16.49■□□□□ 0.23
TRIM43Q96BQ3 PFN2-206ENST00000461930 606 ntTSL 4 BASIC16.49■□□□□ 0.23
TRIM43Q96BQ3 CDC23-208ENST00000505120 455 ntTSL 3 BASIC16.49■□□□□ 0.23
TRIM43Q96BQ3 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC16.49■□□□□ 0.23
TRIM43Q96BQ3 IGHV3-37-201ENST00000518544 340 ntBASIC16.49■□□□□ 0.23
TRIM43Q96BQ3 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC16.49■□□□□ 0.23
TRIM43Q96BQ3 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
TRIM43Q96BQ3 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
TRIM43Q96BQ3 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM43Q96BQ3 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC16.49■□□□□ 0.23
TRIM43Q96BQ3 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC16.49■□□□□ 0.23
TRIM43Q96BQ3 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC16.49■□□□□ 0.23
TRIM43Q96BQ3 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC16.49■□□□□ 0.23
TRIM43Q96BQ3 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
TRIM43Q96BQ3 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM43Q96BQ3 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM43Q96BQ3 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM43Q96BQ3 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM43Q96BQ3 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM43Q96BQ3 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC16.49■□□□□ 0.23
TRIM43Q96BQ3 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM43Q96BQ3 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
TRIM43Q96BQ3 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
TRIM43Q96BQ3 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
TRIM43Q96BQ3 AMT-239ENST00000636865 1914 ntTSL 5 BASIC16.49■□□□□ 0.23
TRIM43Q96BQ3 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM43Q96BQ3 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM43Q96BQ3 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM43Q96BQ3 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM43Q96BQ3 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
TRIM43Q96BQ3 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM43Q96BQ3 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
TRIM43Q96BQ3 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM43Q96BQ3 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM43Q96BQ3 NAGK-204ENST00000443872 878 ntTSL 3 BASIC16.48■□□□□ 0.23
TRIM43Q96BQ3 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC16.48■□□□□ 0.23
TRIM43Q96BQ3 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC16.48■□□□□ 0.23
TRIM43Q96BQ3 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC16.48■□□□□ 0.23
TRIM43Q96BQ3 AL031713.1-201ENST00000564813 661 ntBASIC16.48■□□□□ 0.23
TRIM43Q96BQ3 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC16.48■□□□□ 0.23
TRIM43Q96BQ3 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC16.48■□□□□ 0.23
TRIM43Q96BQ3 AL109837.1-201ENST00000603272 613 ntBASIC16.48■□□□□ 0.23
TRIM43Q96BQ3 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC16.48■□□□□ 0.23
TRIM43Q96BQ3 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC16.48■□□□□ 0.23
TRIM43Q96BQ3 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
TRIM43Q96BQ3 AC244394.1-201ENST00000435000 1665 ntBASIC16.48■□□□□ 0.23
TRIM43Q96BQ3 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM43Q96BQ3 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM43Q96BQ3 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
TRIM43Q96BQ3 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM43Q96BQ3 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM43Q96BQ3 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM43Q96BQ3 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM43Q96BQ3 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
TRIM43Q96BQ3 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.48■□□□□ 0.23
TRIM43Q96BQ3 FAM90A2P-201ENST00000511144 1395 ntBASIC16.48■□□□□ 0.23
TRIM43Q96BQ3 FAM90A25P-201ENST00000528404 1395 ntBASIC16.48■□□□□ 0.23
TRIM43Q96BQ3 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
TRIM43Q96BQ3 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM43Q96BQ3 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM43Q96BQ3 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM43Q96BQ3 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.48■□□□□ 0.23
TRIM43Q96BQ3 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM43Q96BQ3 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM43Q96BQ3 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.48■□□□□ 0.23
TRIM43Q96BQ3 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM43Q96BQ3 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.47■□□□□ 0.23
TRIM43Q96BQ3 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM43Q96BQ3 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM43Q96BQ3 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM43Q96BQ3 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC16.47■□□□□ 0.23
TRIM43Q96BQ3 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
TRIM43Q96BQ3 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM43Q96BQ3 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
TRIM43Q96BQ3 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM43Q96BQ3 AC012362.1-201ENST00000434906 739 ntBASIC16.47■□□□□ 0.23
TRIM43Q96BQ3 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC16.47■□□□□ 0.23
TRIM43Q96BQ3 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms