Protein–RNA interactions for Protein: Q8TC12

RDH11, Retinol dehydrogenase 11, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11Q8TC12 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RDH11Q8TC12 AL513210.1-201ENST00000629608 234 ntBASIC15.22■□□□□ 0.03
RDH11Q8TC12 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.22■□□□□ 0.03
RDH11Q8TC12 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RDH11Q8TC12 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
RDH11Q8TC12 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RDH11Q8TC12 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RDH11Q8TC12 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.22■□□□□ 0.03
RDH11Q8TC12 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
RDH11Q8TC12 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RDH11Q8TC12 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RDH11Q8TC12 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
RDH11Q8TC12 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RDH11Q8TC12 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RDH11Q8TC12 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RDH11Q8TC12 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RDH11Q8TC12 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.21■□□□□ 0.03
RDH11Q8TC12 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RDH11Q8TC12 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RDH11Q8TC12 BX640514.1-201ENST00000583223 1918 ntBASIC15.21■□□□□ 0.03
RDH11Q8TC12 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.21■□□□□ 0.03
RDH11Q8TC12 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
RDH11Q8TC12 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.21■□□□□ 0.03
RDH11Q8TC12 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RDH11Q8TC12 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
RDH11Q8TC12 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RDH11Q8TC12 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RDH11Q8TC12 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
RDH11Q8TC12 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.21■□□□□ 0.03
RDH11Q8TC12 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RDH11Q8TC12 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.21■□□□□ 0.03
RDH11Q8TC12 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RDH11Q8TC12 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
RDH11Q8TC12 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.21■□□□□ 0.03
RDH11Q8TC12 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RDH11Q8TC12 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RDH11Q8TC12 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RDH11Q8TC12 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RDH11Q8TC12 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
RDH11Q8TC12 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
RDH11Q8TC12 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
RDH11Q8TC12 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.21■□□□□ 0.03
RDH11Q8TC12 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.21■□□□□ 0.03
RDH11Q8TC12 FAM58DP-201ENST00000428076 619 ntBASIC15.21■□□□□ 0.03
RDH11Q8TC12 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.21■□□□□ 0.03
RDH11Q8TC12 SERBP1P3-201ENST00000459980 809 ntBASIC15.21■□□□□ 0.03
RDH11Q8TC12 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.21■□□□□ 0.03
RDH11Q8TC12 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.21■□□□□ 0.03
RDH11Q8TC12 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.21■□□□□ 0.03
RDH11Q8TC12 AL079307.3-201ENST00000556114 283 ntBASIC15.21■□□□□ 0.03
RDH11Q8TC12 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
RDH11Q8TC12 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.21■□□□□ 0.03
RDH11Q8TC12 AC025181.2-201ENST00000606994 802 ntBASIC15.21■□□□□ 0.03
RDH11Q8TC12 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.21■□□□□ 0.03
RDH11Q8TC12 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
RDH11Q8TC12 AC134684.3-201ENST00000641758 218 ntBASIC15.21■□□□□ 0.03
RDH11Q8TC12 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RDH11Q8TC12 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.21■□□□□ 0.03
RDH11Q8TC12 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RDH11Q8TC12 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
RDH11Q8TC12 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.02
RDH11Q8TC12 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
RDH11Q8TC12 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
RDH11Q8TC12 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
RDH11Q8TC12 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
RDH11Q8TC12 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
RDH11Q8TC12 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.21■□□□□ 0.02
RDH11Q8TC12 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.21■□□□□ 0.02
RDH11Q8TC12 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.21■□□□□ 0.02
RDH11Q8TC12 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
RDH11Q8TC12 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RDH11Q8TC12 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RDH11Q8TC12 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
RDH11Q8TC12 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
RDH11Q8TC12 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
RDH11Q8TC12 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
RDH11Q8TC12 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RDH11Q8TC12 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RDH11Q8TC12 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RDH11Q8TC12 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RDH11Q8TC12 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RDH11Q8TC12 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
RDH11Q8TC12 AC007787.1-201ENST00000588095 1583 ntBASIC15.2■□□□□ 0.02
RDH11Q8TC12 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
RDH11Q8TC12 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
RDH11Q8TC12 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RDH11Q8TC12 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RDH11Q8TC12 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.2■□□□□ 0.02
RDH11Q8TC12 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.2■□□□□ 0.02
RDH11Q8TC12 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.2■□□□□ 0.02
RDH11Q8TC12 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15.2■□□□□ 0.02
RDH11Q8TC12 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RDH11Q8TC12 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
RDH11Q8TC12 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
RDH11Q8TC12 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RDH11Q8TC12 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.2■□□□□ 0.02
RDH11Q8TC12 MTND6P24-201ENST00000440466 518 ntBASIC15.2■□□□□ 0.02
RDH11Q8TC12 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RDH11Q8TC12 AC004967.1-201ENST00000453589 447 ntBASIC15.2■□□□□ 0.02
RDH11Q8TC12 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms