Protein–RNA interactions for Protein: Q8N9R6

CDRT4, CMT1A duplicated region transcript 4 protein, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT4Q8N9R6 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CDRT4Q8N9R6 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
CDRT4Q8N9R6 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CDRT4Q8N9R6 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDRT4Q8N9R6 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDRT4Q8N9R6 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.35□□□□□ -0.11
CDRT4Q8N9R6 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.35□□□□□ -0.11
CDRT4Q8N9R6 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDRT4Q8N9R6 AP002414.2-201ENST00000591780 3365 ntBASIC14.35□□□□□ -0.11
CDRT4Q8N9R6 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDRT4Q8N9R6 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDRT4Q8N9R6 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDRT4Q8N9R6 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDRT4Q8N9R6 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDRT4Q8N9R6 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDRT4Q8N9R6 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDRT4Q8N9R6 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
CDRT4Q8N9R6 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDRT4Q8N9R6 RN7SL399P-201ENST00000471648 279 ntBASIC14.35□□□□□ -0.11
CDRT4Q8N9R6 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDRT4Q8N9R6 AC093004.1-201ENST00000508850 424 ntBASIC14.35□□□□□ -0.11
CDRT4Q8N9R6 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.35□□□□□ -0.11
CDRT4Q8N9R6 AC023310.3-201ENST00000557027 670 ntBASIC14.35□□□□□ -0.11
CDRT4Q8N9R6 AC100756.1-201ENST00000562736 682 ntBASIC14.35□□□□□ -0.11
CDRT4Q8N9R6 AC138749.3-201ENST00000567691 622 ntBASIC14.35□□□□□ -0.11
CDRT4Q8N9R6 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
CDRT4Q8N9R6 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.35□□□□□ -0.11
CDRT4Q8N9R6 AC116165.1-201ENST00000611806 668 ntBASIC14.35□□□□□ -0.11
CDRT4Q8N9R6 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.35□□□□□ -0.11
CDRT4Q8N9R6 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.35□□□□□ -0.11
CDRT4Q8N9R6 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDRT4Q8N9R6 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDRT4Q8N9R6 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.35□□□□□ -0.11
CDRT4Q8N9R6 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDRT4Q8N9R6 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDRT4Q8N9R6 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDRT4Q8N9R6 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
CDRT4Q8N9R6 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.35□□□□□ -0.11
CDRT4Q8N9R6 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDRT4Q8N9R6 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDRT4Q8N9R6 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDRT4Q8N9R6 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDRT4Q8N9R6 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CDRT4Q8N9R6 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
CDRT4Q8N9R6 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDRT4Q8N9R6 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDRT4Q8N9R6 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.34□□□□□ -0.11
CDRT4Q8N9R6 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDRT4Q8N9R6 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDRT4Q8N9R6 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDRT4Q8N9R6 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.34□□□□□ -0.11
CDRT4Q8N9R6 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CDRT4Q8N9R6 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDRT4Q8N9R6 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CDRT4Q8N9R6 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDRT4Q8N9R6 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDRT4Q8N9R6 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDRT4Q8N9R6 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDRT4Q8N9R6 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDRT4Q8N9R6 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDRT4Q8N9R6 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDRT4Q8N9R6 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDRT4Q8N9R6 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CDRT4Q8N9R6 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDRT4Q8N9R6 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
CDRT4Q8N9R6 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDRT4Q8N9R6 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.34□□□□□ -0.11
CDRT4Q8N9R6 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.34□□□□□ -0.11
CDRT4Q8N9R6 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.34□□□□□ -0.11
CDRT4Q8N9R6 RPL13AP25-201ENST00000484130 612 ntBASIC14.34□□□□□ -0.11
CDRT4Q8N9R6 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDRT4Q8N9R6 AC004066.1-201ENST00000502488 802 ntBASIC14.34□□□□□ -0.11
CDRT4Q8N9R6 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.34□□□□□ -0.11
CDRT4Q8N9R6 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.34□□□□□ -0.11
CDRT4Q8N9R6 SAMD11P1-201ENST00000571429 661 ntBASIC14.34□□□□□ -0.11
CDRT4Q8N9R6 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
CDRT4Q8N9R6 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.34□□□□□ -0.11
CDRT4Q8N9R6 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
CDRT4Q8N9R6 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDRT4Q8N9R6 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.34□□□□□ -0.11
CDRT4Q8N9R6 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.34□□□□□ -0.11
CDRT4Q8N9R6 AC004790.1-201ENST00000612686 536 ntBASIC14.34□□□□□ -0.11
CDRT4Q8N9R6 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.34□□□□□ -0.11
CDRT4Q8N9R6 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDRT4Q8N9R6 AJ011932.1-201ENST00000621707 465 ntBASIC14.34□□□□□ -0.11
CDRT4Q8N9R6 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.34□□□□□ -0.11
CDRT4Q8N9R6 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDRT4Q8N9R6 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.34□□□□□ -0.11
CDRT4Q8N9R6 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDRT4Q8N9R6 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.34□□□□□ -0.11
CDRT4Q8N9R6 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDRT4Q8N9R6 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDRT4Q8N9R6 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDRT4Q8N9R6 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDRT4Q8N9R6 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDRT4Q8N9R6 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CDRT4Q8N9R6 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDRT4Q8N9R6 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
CDRT4Q8N9R6 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDRT4Q8N9R6 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms