Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC15.23■□□□□ 0.03
TRIM48Q8IWZ4 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM48Q8IWZ4 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.23■□□□□ 0.03
TRIM48Q8IWZ4 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM48Q8IWZ4 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.23■□□□□ 0.03
TRIM48Q8IWZ4 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM48Q8IWZ4 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM48Q8IWZ4 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
TRIM48Q8IWZ4 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.22■□□□□ 0.03
TRIM48Q8IWZ4 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM48Q8IWZ4 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.22■□□□□ 0.03
TRIM48Q8IWZ4 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.22■□□□□ 0.03
TRIM48Q8IWZ4 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM48Q8IWZ4 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM48Q8IWZ4 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC15.22■□□□□ 0.03
TRIM48Q8IWZ4 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM48Q8IWZ4 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM48Q8IWZ4 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM48Q8IWZ4 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TRIM48Q8IWZ4 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM48Q8IWZ4 GK-202ENST00000378941 458 ntTSL 3 BASIC15.22■□□□□ 0.03
TRIM48Q8IWZ4 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
TRIM48Q8IWZ4 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.22■□□□□ 0.03
TRIM48Q8IWZ4 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TRIM48Q8IWZ4 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM48Q8IWZ4 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.22■□□□□ 0.03
TRIM48Q8IWZ4 AC007389.4-201ENST00000454674 793 ntBASIC15.22■□□□□ 0.03
TRIM48Q8IWZ4 VDAC1P7-201ENST00000462417 847 ntBASIC15.22■□□□□ 0.03
TRIM48Q8IWZ4 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.22■□□□□ 0.03
TRIM48Q8IWZ4 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.22■□□□□ 0.03
TRIM48Q8IWZ4 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM48Q8IWZ4 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.22■□□□□ 0.03
TRIM48Q8IWZ4 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.22■□□□□ 0.03
TRIM48Q8IWZ4 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC15.22■□□□□ 0.03
TRIM48Q8IWZ4 BRI3BPP1-201ENST00000594224 787 ntBASIC15.22■□□□□ 0.03
TRIM48Q8IWZ4 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.22■□□□□ 0.03
TRIM48Q8IWZ4 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.22■□□□□ 0.03
TRIM48Q8IWZ4 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM48Q8IWZ4 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.22■□□□□ 0.03
TRIM48Q8IWZ4 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM48Q8IWZ4 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.22■□□□□ 0.03
TRIM48Q8IWZ4 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.22■□□□□ 0.03
TRIM48Q8IWZ4 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM48Q8IWZ4 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TRIM48Q8IWZ4 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM48Q8IWZ4 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM48Q8IWZ4 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM48Q8IWZ4 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.22■□□□□ 0.03
TRIM48Q8IWZ4 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.22■□□□□ 0.03
TRIM48Q8IWZ4 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TRIM48Q8IWZ4 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.22■□□□□ 0.03
TRIM48Q8IWZ4 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM48Q8IWZ4 MYO15B-237ENST00000642007 4893 ntBASIC15.22■□□□□ 0.03
TRIM48Q8IWZ4 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.22■□□□□ 0.03
TRIM48Q8IWZ4 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.22■□□□□ 0.03
TRIM48Q8IWZ4 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
TRIM48Q8IWZ4 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRIM48Q8IWZ4 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRIM48Q8IWZ4 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRIM48Q8IWZ4 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
TRIM48Q8IWZ4 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRIM48Q8IWZ4 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRIM48Q8IWZ4 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRIM48Q8IWZ4 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRIM48Q8IWZ4 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.21■□□□□ 0.03
TRIM48Q8IWZ4 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
TRIM48Q8IWZ4 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRIM48Q8IWZ4 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
TRIM48Q8IWZ4 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
TRIM48Q8IWZ4 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRIM48Q8IWZ4 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRIM48Q8IWZ4 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRIM48Q8IWZ4 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRIM48Q8IWZ4 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRIM48Q8IWZ4 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.21■□□□□ 0.03
TRIM48Q8IWZ4 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15.21■□□□□ 0.03
TRIM48Q8IWZ4 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRIM48Q8IWZ4 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
TRIM48Q8IWZ4 C1QBPP1-201ENST00000400117 770 ntBASIC15.21■□□□□ 0.03
TRIM48Q8IWZ4 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.21■□□□□ 0.03
TRIM48Q8IWZ4 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.21■□□□□ 0.03
TRIM48Q8IWZ4 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.21■□□□□ 0.03
TRIM48Q8IWZ4 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.21■□□□□ 0.03
TRIM48Q8IWZ4 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
TRIM48Q8IWZ4 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC15.21■□□□□ 0.03
TRIM48Q8IWZ4 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC15.21■□□□□ 0.03
TRIM48Q8IWZ4 AC015910.1-201ENST00000579400 975 ntBASIC15.21■□□□□ 0.03
TRIM48Q8IWZ4 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.21■□□□□ 0.03
TRIM48Q8IWZ4 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRIM48Q8IWZ4 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.21■□□□□ 0.03
TRIM48Q8IWZ4 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.03
TRIM48Q8IWZ4 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRIM48Q8IWZ4 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.21■□□□□ 0.02
TRIM48Q8IWZ4 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRIM48Q8IWZ4 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRIM48Q8IWZ4 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRIM48Q8IWZ4 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRIM48Q8IWZ4 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRIM48Q8IWZ4 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TRIM48Q8IWZ4 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms