Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC16.41■□□□□ 0.22
RNF135Q8IUD6 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC16.41■□□□□ 0.22
RNF135Q8IUD6 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC16.41■□□□□ 0.22
RNF135Q8IUD6 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC16.41■□□□□ 0.22
RNF135Q8IUD6 AP006547.1-201ENST00000563435 692 ntBASIC16.41■□□□□ 0.22
RNF135Q8IUD6 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC16.41■□□□□ 0.22
RNF135Q8IUD6 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.41■□□□□ 0.22
RNF135Q8IUD6 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC16.41■□□□□ 0.22
RNF135Q8IUD6 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
RNF135Q8IUD6 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC16.41■□□□□ 0.22
RNF135Q8IUD6 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.41■□□□□ 0.22
RNF135Q8IUD6 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF135Q8IUD6 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC16.41■□□□□ 0.22
RNF135Q8IUD6 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RNF135Q8IUD6 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF135Q8IUD6 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.41■□□□□ 0.22
RNF135Q8IUD6 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RNF135Q8IUD6 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF135Q8IUD6 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF135Q8IUD6 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF135Q8IUD6 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
RNF135Q8IUD6 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RNF135Q8IUD6 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF135Q8IUD6 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.4■□□□□ 0.22
RNF135Q8IUD6 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.4■□□□□ 0.22
RNF135Q8IUD6 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF135Q8IUD6 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
RNF135Q8IUD6 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RNF135Q8IUD6 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF135Q8IUD6 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF135Q8IUD6 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF135Q8IUD6 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
RNF135Q8IUD6 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RNF135Q8IUD6 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
RNF135Q8IUD6 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
RNF135Q8IUD6 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RNF135Q8IUD6 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.4■□□□□ 0.22
RNF135Q8IUD6 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.4■□□□□ 0.22
RNF135Q8IUD6 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.4■□□□□ 0.22
RNF135Q8IUD6 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC16.4■□□□□ 0.22
RNF135Q8IUD6 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC16.4■□□□□ 0.22
RNF135Q8IUD6 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC16.4■□□□□ 0.22
RNF135Q8IUD6 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC16.4■□□□□ 0.22
RNF135Q8IUD6 TMEM198B-204ENST00000484016 896 ntBASIC16.4■□□□□ 0.22
RNF135Q8IUD6 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.4■□□□□ 0.22
RNF135Q8IUD6 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
RNF135Q8IUD6 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.4■□□□□ 0.22
RNF135Q8IUD6 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RNF135Q8IUD6 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
RNF135Q8IUD6 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RNF135Q8IUD6 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC16.4■□□□□ 0.22
RNF135Q8IUD6 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC16.4■□□□□ 0.22
RNF135Q8IUD6 MIR4741-201ENST00000579822 90 ntBASIC16.4■□□□□ 0.22
RNF135Q8IUD6 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RNF135Q8IUD6 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.4■□□□□ 0.22
RNF135Q8IUD6 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
RNF135Q8IUD6 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.4■□□□□ 0.22
RNF135Q8IUD6 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF135Q8IUD6 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RNF135Q8IUD6 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF135Q8IUD6 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RNF135Q8IUD6 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.4■□□□□ 0.22
RNF135Q8IUD6 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.4■□□□□ 0.22
RNF135Q8IUD6 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
RNF135Q8IUD6 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF135Q8IUD6 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
RNF135Q8IUD6 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC16.4■□□□□ 0.22
RNF135Q8IUD6 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF135Q8IUD6 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RNF135Q8IUD6 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF135Q8IUD6 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
RNF135Q8IUD6 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
RNF135Q8IUD6 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.22
RNF135Q8IUD6 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.22
RNF135Q8IUD6 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC16.39■□□□□ 0.21
RNF135Q8IUD6 AC010491.1-201ENST00000563101 2797 ntBASIC16.39■□□□□ 0.21
RNF135Q8IUD6 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF135Q8IUD6 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF135Q8IUD6 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RNF135Q8IUD6 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RNF135Q8IUD6 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.39■□□□□ 0.21
RNF135Q8IUD6 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF135Q8IUD6 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.39■□□□□ 0.21
RNF135Q8IUD6 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.39■□□□□ 0.21
RNF135Q8IUD6 KRT8P37-201ENST00000451609 1420 ntBASIC16.39■□□□□ 0.21
RNF135Q8IUD6 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF135Q8IUD6 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF135Q8IUD6 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RNF135Q8IUD6 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF135Q8IUD6 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RNF135Q8IUD6 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RNF135Q8IUD6 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
RNF135Q8IUD6 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC16.39■□□□□ 0.21
RNF135Q8IUD6 VDAC1P7-201ENST00000462417 847 ntBASIC16.39■□□□□ 0.21
RNF135Q8IUD6 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC16.39■□□□□ 0.21
RNF135Q8IUD6 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC16.39■□□□□ 0.21
RNF135Q8IUD6 AC104982.3-201ENST00000581995 514 ntBASIC16.39■□□□□ 0.21
RNF135Q8IUD6 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC16.39■□□□□ 0.21
RNF135Q8IUD6 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC16.39■□□□□ 0.21
RNF135Q8IUD6 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms