Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COL23A1Q86Y22 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC19■□□□□ 0.63
COL23A1Q86Y22 AL157414.3-201ENST00000624276 1954 ntBASIC19■□□□□ 0.63
COL23A1Q86Y22 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
COL23A1Q86Y22 AC011676.5-201ENST00000624864 2660 ntBASIC19■□□□□ 0.63
COL23A1Q86Y22 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
COL23A1Q86Y22 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
COL23A1Q86Y22 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COL23A1Q86Y22 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19■□□□□ 0.63
COL23A1Q86Y22 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
COL23A1Q86Y22 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COL23A1Q86Y22 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COL23A1Q86Y22 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COL23A1Q86Y22 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC19■□□□□ 0.63
COL23A1Q86Y22 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COL23A1Q86Y22 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC19■□□□□ 0.63
COL23A1Q86Y22 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COL23A1Q86Y22 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
COL23A1Q86Y22 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL23A1Q86Y22 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
COL23A1Q86Y22 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL23A1Q86Y22 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
COL23A1Q86Y22 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
COL23A1Q86Y22 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
COL23A1Q86Y22 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
COL23A1Q86Y22 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
COL23A1Q86Y22 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
COL23A1Q86Y22 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC18.99■□□□□ 0.63
COL23A1Q86Y22 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC18.99■□□□□ 0.63
COL23A1Q86Y22 REEP5-205ENST00000504247 480 ntTSL 5 BASIC18.99■□□□□ 0.63
COL23A1Q86Y22 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC18.99■□□□□ 0.63
COL23A1Q86Y22 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC18.99■□□□□ 0.63
COL23A1Q86Y22 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC18.99■□□□□ 0.63
COL23A1Q86Y22 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC18.99■□□□□ 0.63
COL23A1Q86Y22 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
COL23A1Q86Y22 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.99■□□□□ 0.63
COL23A1Q86Y22 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL23A1Q86Y22 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.99■□□□□ 0.63
COL23A1Q86Y22 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL23A1Q86Y22 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL23A1Q86Y22 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
COL23A1Q86Y22 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
COL23A1Q86Y22 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL23A1Q86Y22 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL23A1Q86Y22 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL23A1Q86Y22 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL23A1Q86Y22 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL23A1Q86Y22 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL23A1Q86Y22 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
COL23A1Q86Y22 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
COL23A1Q86Y22 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COL23A1Q86Y22 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COL23A1Q86Y22 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COL23A1Q86Y22 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.98■□□□□ 0.63
COL23A1Q86Y22 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL23A1Q86Y22 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL23A1Q86Y22 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC18.98■□□□□ 0.63
COL23A1Q86Y22 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC18.98■□□□□ 0.63
COL23A1Q86Y22 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
COL23A1Q86Y22 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL23A1Q86Y22 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COL23A1Q86Y22 MST1L-201ENST00000442552 2185 ntBASIC18.98■□□□□ 0.63
COL23A1Q86Y22 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC18.98■□□□□ 0.63
COL23A1Q86Y22 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
COL23A1Q86Y22 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL23A1Q86Y22 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COL23A1Q86Y22 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COL23A1Q86Y22 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL23A1Q86Y22 NSD1-211ENST00000511258 809 ntTSL 3 BASIC18.98■□□□□ 0.63
COL23A1Q86Y22 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
COL23A1Q86Y22 C2orf69P1-201ENST00000563532 1093 ntBASIC18.98■□□□□ 0.63
COL23A1Q86Y22 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COL23A1Q86Y22 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC18.98■□□□□ 0.63
COL23A1Q86Y22 MIR4522-201ENST00000584932 87 ntBASIC18.98■□□□□ 0.63
COL23A1Q86Y22 HPN-206ENST00000597419 1212 ntTSL 5 BASIC18.98■□□□□ 0.63
COL23A1Q86Y22 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC18.98■□□□□ 0.63
COL23A1Q86Y22 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COL23A1Q86Y22 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL23A1Q86Y22 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL23A1Q86Y22 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COL23A1Q86Y22 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL23A1Q86Y22 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
COL23A1Q86Y22 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL23A1Q86Y22 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL23A1Q86Y22 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.98■□□□□ 0.63
COL23A1Q86Y22 AC069224.1-201ENST00000566372 1715 ntBASIC18.97■□□□□ 0.63
COL23A1Q86Y22 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL23A1Q86Y22 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL23A1Q86Y22 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL23A1Q86Y22 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL23A1Q86Y22 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL23A1Q86Y22 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC18.97■□□□□ 0.63
COL23A1Q86Y22 ALG1L13P-202ENST00000519320 584 ntBASIC18.97■□□□□ 0.63
COL23A1Q86Y22 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC18.97■□□□□ 0.63
COL23A1Q86Y22 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
COL23A1Q86Y22 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL23A1Q86Y22 PHBP15-201ENST00000574228 665 ntBASIC18.97■□□□□ 0.63
COL23A1Q86Y22 AC138466.4-201ENST00000623965 852 ntBASIC18.97■□□□□ 0.63
COL23A1Q86Y22 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL23A1Q86Y22 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms