Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 AC084121.3-201ENST00000641716 218 ntBASIC15.65■□□□□ 0.1
PRAMEP78395 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PRAMEP78395 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PRAMEP78395 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
PRAMEP78395 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.65■□□□□ 0.1
PRAMEP78395 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.65■□□□□ 0.1
PRAMEP78395 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.65■□□□□ 0.1
PRAMEP78395 AC100757.3-201ENST00000622361 1406 ntBASIC15.65■□□□□ 0.1
PRAMEP78395 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PRAMEP78395 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
PRAMEP78395 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRAMEP78395 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
PRAMEP78395 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC15.65■□□□□ 0.1
PRAMEP78395 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRAMEP78395 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PRAMEP78395 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRAMEP78395 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRAMEP78395 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.65■□□□□ 0.1
PRAMEP78395 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PRAMEP78395 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PRAMEP78395 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.65■□□□□ 0.1
PRAMEP78395 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.65■□□□□ 0.1
PRAMEP78395 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.1
PRAMEP78395 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PRAMEP78395 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
PRAMEP78395 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PRAMEP78395 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
PRAMEP78395 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
PRAMEP78395 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRAMEP78395 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
PRAMEP78395 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRAMEP78395 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
PRAMEP78395 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PRAMEP78395 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRAMEP78395 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.64■□□□□ 0.09
PRAMEP78395 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRAMEP78395 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.64■□□□□ 0.09
PRAMEP78395 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PRAMEP78395 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15.64■□□□□ 0.09
PRAMEP78395 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.64■□□□□ 0.09
PRAMEP78395 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PRAMEP78395 AC241585.1-201ENST00000433527 519 ntBASIC15.64■□□□□ 0.09
PRAMEP78395 KRT18P64-201ENST00000434946 1219 ntBASIC15.64■□□□□ 0.09
PRAMEP78395 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.64■□□□□ 0.09
PRAMEP78395 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.64■□□□□ 0.09
PRAMEP78395 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC15.64■□□□□ 0.09
PRAMEP78395 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.64■□□□□ 0.09
PRAMEP78395 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.64■□□□□ 0.09
PRAMEP78395 LINC01115-203ENST00000606068 577 ntBASIC15.64■□□□□ 0.09
PRAMEP78395 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.64■□□□□ 0.09
PRAMEP78395 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRAMEP78395 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRAMEP78395 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRAMEP78395 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.64■□□□□ 0.09
PRAMEP78395 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.64■□□□□ 0.09
PRAMEP78395 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRAMEP78395 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.64■□□□□ 0.09
PRAMEP78395 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.64■□□□□ 0.09
PRAMEP78395 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.64■□□□□ 0.09
PRAMEP78395 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRAMEP78395 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
PRAMEP78395 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRAMEP78395 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRAMEP78395 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRAMEP78395 AC023024.2-201ENST00000623561 1993 ntBASIC15.64■□□□□ 0.09
PRAMEP78395 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PRAMEP78395 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.64■□□□□ 0.09
PRAMEP78395 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRAMEP78395 SNX18-202ENST00000343017 3140 ntBASIC15.63■□□□□ 0.09
PRAMEP78395 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
PRAMEP78395 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PRAMEP78395 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.63■□□□□ 0.09
PRAMEP78395 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.63■□□□□ 0.09
PRAMEP78395 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.63■□□□□ 0.09
PRAMEP78395 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRAMEP78395 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRAMEP78395 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PRAMEP78395 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRAMEP78395 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRAMEP78395 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PRAMEP78395 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRAMEP78395 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
PRAMEP78395 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRAMEP78395 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
PRAMEP78395 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.63■□□□□ 0.09
PRAMEP78395 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRAMEP78395 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PRAMEP78395 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PRAMEP78395 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.63■□□□□ 0.09
PRAMEP78395 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PRAMEP78395 AL133267.1-201ENST00000398220 340 ntBASIC15.63■□□□□ 0.09
PRAMEP78395 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.63■□□□□ 0.09
PRAMEP78395 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC15.63■□□□□ 0.09
PRAMEP78395 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PRAMEP78395 RPL13P2-201ENST00000440687 659 ntBASIC15.63■□□□□ 0.09
PRAMEP78395 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.63■□□□□ 0.09
PRAMEP78395 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PRAMEP78395 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.63■□□□□ 0.09
PRAMEP78395 DUX4L27-201ENST00000554796 1261 ntBASIC15.63■□□□□ 0.09
PRAMEP78395 AC044860.1-202ENST00000559481 777 ntBASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms