Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC16.13■□□□□ 0.17
CLCN4P51793 KLK11-210ENST00000600362 759 ntTSL 3 BASIC16.13■□□□□ 0.17
CLCN4P51793 AC007663.3-201ENST00000609632 465 ntBASIC16.13■□□□□ 0.17
CLCN4P51793 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CLCN4P51793 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLCN4P51793 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLCN4P51793 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.13■□□□□ 0.17
CLCN4P51793 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLCN4P51793 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLCN4P51793 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.13■□□□□ 0.17
CLCN4P51793 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLCN4P51793 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLCN4P51793 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.13■□□□□ 0.17
CLCN4P51793 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLCN4P51793 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.13■□□□□ 0.17
CLCN4P51793 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLCN4P51793 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CLCN4P51793 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.13■□□□□ 0.17
CLCN4P51793 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLCN4P51793 AC112504.1-201ENST00000623415 1841 ntBASIC16.12■□□□□ 0.17
CLCN4P51793 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLCN4P51793 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLCN4P51793 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CLCN4P51793 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLCN4P51793 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLCN4P51793 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.12■□□□□ 0.17
CLCN4P51793 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLCN4P51793 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLCN4P51793 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
CLCN4P51793 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLCN4P51793 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC16.12■□□□□ 0.17
CLCN4P51793 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLCN4P51793 ATP6V0CP2-201ENST00000469409 207 ntBASIC16.12■□□□□ 0.17
CLCN4P51793 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC16.12■□□□□ 0.17
CLCN4P51793 NCK2-206ENST00000522586 490 ntTSL 5 BASIC16.12■□□□□ 0.17
CLCN4P51793 RERG-205ENST00000537647 935 ntTSL 2 BASIC16.12■□□□□ 0.17
CLCN4P51793 AC079328.1-201ENST00000560358 952 ntBASIC16.12■□□□□ 0.17
CLCN4P51793 COG4-212ENST00000564653 590 ntTSL 5 BASIC16.12■□□□□ 0.17
CLCN4P51793 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC16.12■□□□□ 0.17
CLCN4P51793 MIR3619-201ENST00000579667 83 ntBASIC16.12■□□□□ 0.17
CLCN4P51793 NDUFV2P1-201ENST00000596415 907 ntBASIC16.12■□□□□ 0.17
CLCN4P51793 OR10B1P-201ENST00000601666 907 ntBASIC16.12■□□□□ 0.17
CLCN4P51793 AC073413.1-201ENST00000603927 732 ntBASIC16.12■□□□□ 0.17
CLCN4P51793 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
CLCN4P51793 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLCN4P51793 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLCN4P51793 AL645728.2-202ENST00000641679 227 ntBASIC16.12■□□□□ 0.17
CLCN4P51793 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC16.12■□□□□ 0.17
CLCN4P51793 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLCN4P51793 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLCN4P51793 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLCN4P51793 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLCN4P51793 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC16.12■□□□□ 0.17
CLCN4P51793 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLCN4P51793 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLCN4P51793 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLCN4P51793 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLCN4P51793 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.12■□□□□ 0.17
CLCN4P51793 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLCN4P51793 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLCN4P51793 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
CLCN4P51793 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.11■□□□□ 0.17
CLCN4P51793 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLCN4P51793 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLCN4P51793 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.11■□□□□ 0.17
CLCN4P51793 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLCN4P51793 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
CLCN4P51793 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.11■□□□□ 0.17
CLCN4P51793 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.11■□□□□ 0.17
CLCN4P51793 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLCN4P51793 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLCN4P51793 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.11■□□□□ 0.17
CLCN4P51793 RGS5-214ENST00000429865 754 ntTSL 3 BASIC16.11■□□□□ 0.17
CLCN4P51793 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC16.11■□□□□ 0.17
CLCN4P51793 EIF4HP1-201ENST00000453115 687 ntBASIC16.11■□□□□ 0.17
CLCN4P51793 UPF3AP2-201ENST00000457924 1132 ntBASIC16.11■□□□□ 0.17
CLCN4P51793 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC16.11■□□□□ 0.17
CLCN4P51793 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC16.11■□□□□ 0.17
CLCN4P51793 AP003171.2-201ENST00000528208 925 ntBASIC16.11■□□□□ 0.17
CLCN4P51793 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC16.11■□□□□ 0.17
CLCN4P51793 ZACNP1-201ENST00000612259 710 ntBASIC16.11■□□□□ 0.17
CLCN4P51793 AC015967.2-201ENST00000624092 234 ntBASIC16.11■□□□□ 0.17
CLCN4P51793 AC006435.4-201ENST00000625037 234 ntBASIC16.11■□□□□ 0.17
CLCN4P51793 AL356737.1-201ENST00000634391 234 ntBASIC16.11■□□□□ 0.17
CLCN4P51793 AC138627.1-207ENST00000641560 1006 ntBASIC16.11■□□□□ 0.17
CLCN4P51793 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLCN4P51793 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CLCN4P51793 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLCN4P51793 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLCN4P51793 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLCN4P51793 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLCN4P51793 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLCN4P51793 LINC02199-201ENST00000506655 2702 ntBASIC16.1■□□□□ 0.17
CLCN4P51793 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLCN4P51793 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLCN4P51793 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLCN4P51793 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.1■□□□□ 0.17
CLCN4P51793 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CLCN4P51793 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLCN4P51793 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms