Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.88■□□□□ 0.13
ERCC2P18074 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
ERCC2P18074 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
ERCC2P18074 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.88■□□□□ 0.13
ERCC2P18074 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
ERCC2P18074 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ERCC2P18074 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.88■□□□□ 0.13
ERCC2P18074 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ERCC2P18074 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ERCC2P18074 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ERCC2P18074 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ERCC2P18074 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ERCC2P18074 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.88■□□□□ 0.13
ERCC2P18074 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ERCC2P18074 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.88■□□□□ 0.13
ERCC2P18074 AP000845.1-201ENST00000581677 2131 ntBASIC15.88■□□□□ 0.13
ERCC2P18074 AL359258.3-201ENST00000622910 2331 ntBASIC15.88■□□□□ 0.13
ERCC2P18074 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ERCC2P18074 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ERCC2P18074 WASH3P-207ENST00000560956 1394 ntBASIC15.87■□□□□ 0.13
ERCC2P18074 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.87■□□□□ 0.13
ERCC2P18074 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
ERCC2P18074 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
ERCC2P18074 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
ERCC2P18074 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ERCC2P18074 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ERCC2P18074 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.87■□□□□ 0.13
ERCC2P18074 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
ERCC2P18074 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
ERCC2P18074 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
ERCC2P18074 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ERCC2P18074 TNRC18P2-201ENST00000417666 2714 ntBASIC15.87■□□□□ 0.13
ERCC2P18074 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
ERCC2P18074 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ERCC2P18074 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
ERCC2P18074 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ERCC2P18074 RPL13AP25-201ENST00000484130 612 ntBASIC15.87■□□□□ 0.13
ERCC2P18074 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.87■□□□□ 0.13
ERCC2P18074 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.87■□□□□ 0.13
ERCC2P18074 AC092552.1-201ENST00000547243 906 ntBASIC15.87■□□□□ 0.13
ERCC2P18074 AC190387.1-201ENST00000551683 408 ntBASIC15.87■□□□□ 0.13
ERCC2P18074 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC15.87■□□□□ 0.13
ERCC2P18074 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
ERCC2P18074 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.87■□□□□ 0.13
ERCC2P18074 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.87■□□□□ 0.13
ERCC2P18074 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.87■□□□□ 0.13
ERCC2P18074 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
ERCC2P18074 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.87■□□□□ 0.13
ERCC2P18074 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.87■□□□□ 0.13
ERCC2P18074 AC092364.2-202ENST00000597012 1073 ntBASIC15.87■□□□□ 0.13
ERCC2P18074 AC007431.3-201ENST00000623221 587 ntBASIC15.87■□□□□ 0.13
ERCC2P18074 REXO1L4P-201ENST00000605109 1937 ntBASIC15.87■□□□□ 0.13
ERCC2P18074 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
ERCC2P18074 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
ERCC2P18074 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
ERCC2P18074 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
ERCC2P18074 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.87■□□□□ 0.13
ERCC2P18074 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ERCC2P18074 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ERCC2P18074 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
ERCC2P18074 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
ERCC2P18074 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ERCC2P18074 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
ERCC2P18074 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
ERCC2P18074 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ERCC2P18074 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.86■□□□□ 0.13
ERCC2P18074 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
ERCC2P18074 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ERCC2P18074 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ERCC2P18074 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
ERCC2P18074 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
ERCC2P18074 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
ERCC2P18074 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.86■□□□□ 0.13
ERCC2P18074 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ERCC2P18074 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ERCC2P18074 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ERCC2P18074 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
ERCC2P18074 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
ERCC2P18074 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ERCC2P18074 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
ERCC2P18074 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.86■□□□□ 0.13
ERCC2P18074 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ERCC2P18074 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.86■□□□□ 0.13
ERCC2P18074 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
ERCC2P18074 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ERCC2P18074 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ERCC2P18074 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC15.86■□□□□ 0.13
ERCC2P18074 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.86■□□□□ 0.13
ERCC2P18074 MYCLP2-201ENST00000449268 967 ntBASIC15.86■□□□□ 0.13
ERCC2P18074 AC004066.1-201ENST00000502488 802 ntBASIC15.86■□□□□ 0.13
ERCC2P18074 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.86■□□□□ 0.13
ERCC2P18074 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.86■□□□□ 0.13
ERCC2P18074 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.86■□□□□ 0.13
ERCC2P18074 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.86■□□□□ 0.13
ERCC2P18074 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.86■□□□□ 0.13
ERCC2P18074 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
ERCC2P18074 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ERCC2P18074 AC063926.3-201ENST00000624734 5658 ntBASIC15.86■□□□□ 0.13
ERCC2P18074 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ERCC2P18074 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms