Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC14.57□□□□□ -0.08
RAB40ALP0C0E4 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
RAB40ALP0C0E4 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RAB40ALP0C0E4 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC14.57□□□□□ -0.08
RAB40ALP0C0E4 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC14.57□□□□□ -0.08
RAB40ALP0C0E4 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC14.57□□□□□ -0.08
RAB40ALP0C0E4 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
RAB40ALP0C0E4 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB40ALP0C0E4 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB40ALP0C0E4 AL138799.1-201ENST00000448213 1675 ntBASIC14.57□□□□□ -0.08
RAB40ALP0C0E4 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.57□□□□□ -0.08
RAB40ALP0C0E4 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB40ALP0C0E4 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB40ALP0C0E4 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB40ALP0C0E4 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB40ALP0C0E4 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
RAB40ALP0C0E4 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
RAB40ALP0C0E4 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.57□□□□□ -0.08
RAB40ALP0C0E4 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB40ALP0C0E4 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB40ALP0C0E4 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB40ALP0C0E4 AC092850.2-201ENST00000623821 2697 ntBASIC14.57□□□□□ -0.08
RAB40ALP0C0E4 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB40ALP0C0E4 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC14.56□□□□□ -0.08
RAB40ALP0C0E4 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
RAB40ALP0C0E4 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB40ALP0C0E4 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.56□□□□□ -0.08
RAB40ALP0C0E4 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
RAB40ALP0C0E4 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RAB40ALP0C0E4 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB40ALP0C0E4 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB40ALP0C0E4 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB40ALP0C0E4 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.56□□□□□ -0.08
RAB40ALP0C0E4 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB40ALP0C0E4 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB40ALP0C0E4 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB40ALP0C0E4 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB40ALP0C0E4 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC14.56□□□□□ -0.08
RAB40ALP0C0E4 CNN2P8-201ENST00000421872 913 ntBASIC14.56□□□□□ -0.08
RAB40ALP0C0E4 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC14.56□□□□□ -0.08
RAB40ALP0C0E4 YBX1P6-201ENST00000442962 1002 ntBASIC14.56□□□□□ -0.08
RAB40ALP0C0E4 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC14.56□□□□□ -0.08
RAB40ALP0C0E4 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC14.56□□□□□ -0.08
RAB40ALP0C0E4 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RAB40ALP0C0E4 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC14.56□□□□□ -0.08
RAB40ALP0C0E4 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RAB40ALP0C0E4 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
RAB40ALP0C0E4 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RAB40ALP0C0E4 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC14.56□□□□□ -0.08
RAB40ALP0C0E4 RPL8-205ENST00000527914 551 ntTSL 3 BASIC14.56□□□□□ -0.08
RAB40ALP0C0E4 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
RAB40ALP0C0E4 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC14.56□□□□□ -0.08
RAB40ALP0C0E4 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC14.56□□□□□ -0.08
RAB40ALP0C0E4 GNRHR2-203ENST00000581100 1187 ntBASIC14.56□□□□□ -0.08
RAB40ALP0C0E4 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.56□□□□□ -0.08
RAB40ALP0C0E4 BX539320.1-201ENST00000623759 877 ntBASIC14.56□□□□□ -0.08
RAB40ALP0C0E4 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB40ALP0C0E4 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB40ALP0C0E4 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RAB40ALP0C0E4 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB40ALP0C0E4 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
RAB40ALP0C0E4 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB40ALP0C0E4 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
RAB40ALP0C0E4 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.56□□□□□ -0.08
RAB40ALP0C0E4 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RAB40ALP0C0E4 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB40ALP0C0E4 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RAB40ALP0C0E4 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.56□□□□□ -0.08
RAB40ALP0C0E4 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB40ALP0C0E4 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RAB40ALP0C0E4 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.56□□□□□ -0.08
RAB40ALP0C0E4 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB40ALP0C0E4 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB40ALP0C0E4 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB40ALP0C0E4 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RAB40ALP0C0E4 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB40ALP0C0E4 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.55□□□□□ -0.08
RAB40ALP0C0E4 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RAB40ALP0C0E4 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.55□□□□□ -0.08
RAB40ALP0C0E4 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB40ALP0C0E4 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RAB40ALP0C0E4 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB40ALP0C0E4 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB40ALP0C0E4 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB40ALP0C0E4 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RAB40ALP0C0E4 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB40ALP0C0E4 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.55□□□□□ -0.08
RAB40ALP0C0E4 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RAB40ALP0C0E4 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.55□□□□□ -0.08
RAB40ALP0C0E4 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB40ALP0C0E4 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC14.55□□□□□ -0.08
RAB40ALP0C0E4 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB40ALP0C0E4 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
RAB40ALP0C0E4 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC14.55□□□□□ -0.08
RAB40ALP0C0E4 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC14.55□□□□□ -0.08
RAB40ALP0C0E4 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC14.55□□□□□ -0.08
RAB40ALP0C0E4 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC14.55□□□□□ -0.08
RAB40ALP0C0E4 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.55□□□□□ -0.08
RAB40ALP0C0E4 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RAB40ALP0C0E4 PACS1-203ENST00000524815 628 ntTSL 4 BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms