Protein–RNA interactions for Protein: P04180

LCAT, Phosphatidylcholine-sterol acyltransferase, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCATP04180 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LCATP04180 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LCATP04180 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
LCATP04180 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LCATP04180 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.57□□□□□ -0.24
LCATP04180 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LCATP04180 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.57□□□□□ -0.24
LCATP04180 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LCATP04180 AC006058.4-201ENST00000624016 1670 ntBASIC13.57□□□□□ -0.24
LCATP04180 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
LCATP04180 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LCATP04180 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.57□□□□□ -0.24
LCATP04180 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
LCATP04180 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LCATP04180 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LCATP04180 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.57□□□□□ -0.24
LCATP04180 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LCATP04180 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.57□□□□□ -0.24
LCATP04180 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC13.57□□□□□ -0.24
LCATP04180 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
LCATP04180 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.57□□□□□ -0.24
LCATP04180 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LCATP04180 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC13.57□□□□□ -0.24
LCATP04180 AC015922.1-201ENST00000421102 1152 ntBASIC13.57□□□□□ -0.24
LCATP04180 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC13.57□□□□□ -0.24
LCATP04180 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC13.57□□□□□ -0.24
LCATP04180 AC092580.3-201ENST00000430932 139 ntBASIC13.57□□□□□ -0.24
LCATP04180 KRT18P64-201ENST00000434946 1219 ntBASIC13.57□□□□□ -0.24
LCATP04180 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LCATP04180 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LCATP04180 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC13.57□□□□□ -0.24
LCATP04180 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.57□□□□□ -0.24
LCATP04180 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LCATP04180 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.57□□□□□ -0.24
LCATP04180 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.57□□□□□ -0.24
LCATP04180 RPL28-205ENST00000558131 444 ntTSL 5 BASIC13.57□□□□□ -0.24
LCATP04180 AC044860.1-202ENST00000559481 777 ntBASIC13.57□□□□□ -0.24
LCATP04180 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.57□□□□□ -0.24
LCATP04180 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.57□□□□□ -0.24
LCATP04180 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.57□□□□□ -0.24
LCATP04180 LINC01115-203ENST00000606068 577 ntBASIC13.57□□□□□ -0.24
LCATP04180 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.57□□□□□ -0.24
LCATP04180 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LCATP04180 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
LCATP04180 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.57□□□□□ -0.24
LCATP04180 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
LCATP04180 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
LCATP04180 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LCATP04180 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LCATP04180 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
LCATP04180 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LCATP04180 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.57□□□□□ -0.24
LCATP04180 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
LCATP04180 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC13.57□□□□□ -0.24
LCATP04180 DEK-201ENST00000244776 1441 ntTSL 2 BASIC13.56□□□□□ -0.24
LCATP04180 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LCATP04180 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC13.56□□□□□ -0.24
LCATP04180 AC023024.2-201ENST00000623561 1993 ntBASIC13.56□□□□□ -0.24
LCATP04180 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LCATP04180 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
LCATP04180 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LCATP04180 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LCATP04180 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
LCATP04180 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LCATP04180 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC13.56□□□□□ -0.24
LCATP04180 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LCATP04180 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.56□□□□□ -0.24
LCATP04180 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LCATP04180 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
LCATP04180 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
LCATP04180 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
LCATP04180 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LCATP04180 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
LCATP04180 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC13.56□□□□□ -0.24
LCATP04180 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LCATP04180 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
LCATP04180 AC241585.1-201ENST00000433527 519 ntBASIC13.56□□□□□ -0.24
LCATP04180 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC13.56□□□□□ -0.24
LCATP04180 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC13.56□□□□□ -0.24
LCATP04180 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC13.56□□□□□ -0.24
LCATP04180 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.56□□□□□ -0.24
LCATP04180 TIMM17BP1-201ENST00000545713 516 ntBASIC13.56□□□□□ -0.24
LCATP04180 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.56□□□□□ -0.24
LCATP04180 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC13.56□□□□□ -0.24
LCATP04180 GPALPP1-207ENST00000611650 899 ntBASIC13.56□□□□□ -0.24
LCATP04180 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC13.56□□□□□ -0.24
LCATP04180 AC006538.3-201ENST00000612495 578 ntBASIC13.56□□□□□ -0.24
LCATP04180 AL590560.3-201ENST00000623350 461 ntBASIC13.56□□□□□ -0.24
LCATP04180 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
LCATP04180 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC13.56□□□□□ -0.24
LCATP04180 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LCATP04180 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
LCATP04180 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LCATP04180 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LCATP04180 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LCATP04180 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LCATP04180 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13.56□□□□□ -0.24
LCATP04180 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
LCATP04180 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LCATP04180 C8orf49-201ENST00000525043 1968 ntBASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms