Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.83■□□□□ 0.12
MT-ND3P03897 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.83■□□□□ 0.12
MT-ND3P03897 AJ011932.1-201ENST00000621707 465 ntBASIC15.83■□□□□ 0.12
MT-ND3P03897 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
MT-ND3P03897 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MT-ND3P03897 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.83■□□□□ 0.12
MT-ND3P03897 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MT-ND3P03897 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
MT-ND3P03897 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MT-ND3P03897 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MT-ND3P03897 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MT-ND3P03897 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
MT-ND3P03897 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
MT-ND3P03897 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.83■□□□□ 0.12
MT-ND3P03897 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MT-ND3P03897 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MT-ND3P03897 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MT-ND3P03897 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MT-ND3P03897 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MT-ND3P03897 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.83■□□□□ 0.12
MT-ND3P03897 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.83■□□□□ 0.12
MT-ND3P03897 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
MT-ND3P03897 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.83■□□□□ 0.12
MT-ND3P03897 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MT-ND3P03897 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
MT-ND3P03897 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MT-ND3P03897 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MT-ND3P03897 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
MT-ND3P03897 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
MT-ND3P03897 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MT-ND3P03897 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
MT-ND3P03897 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
MT-ND3P03897 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
MT-ND3P03897 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
MT-ND3P03897 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MT-ND3P03897 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MT-ND3P03897 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MT-ND3P03897 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MT-ND3P03897 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MT-ND3P03897 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.82■□□□□ 0.12
MT-ND3P03897 AC107890.1-201ENST00000422478 521 ntBASIC15.82■□□□□ 0.12
MT-ND3P03897 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.82■□□□□ 0.12
MT-ND3P03897 PHKG1P2-201ENST00000457537 863 ntBASIC15.82■□□□□ 0.12
MT-ND3P03897 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC15.82■□□□□ 0.12
MT-ND3P03897 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.82■□□□□ 0.12
MT-ND3P03897 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.82■□□□□ 0.12
MT-ND3P03897 AC093214.1-201ENST00000511688 1107 ntBASIC15.82■□□□□ 0.12
MT-ND3P03897 AC105233.2-201ENST00000523697 349 ntBASIC15.82■□□□□ 0.12
MT-ND3P03897 AF228730.5-201ENST00000530288 346 ntBASIC15.82■□□□□ 0.12
MT-ND3P03897 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC15.82■□□□□ 0.12
MT-ND3P03897 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.82■□□□□ 0.12
MT-ND3P03897 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.82■□□□□ 0.12
MT-ND3P03897 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MT-ND3P03897 AC005498.2-205ENST00000593218 784 ntBASIC15.82■□□□□ 0.12
MT-ND3P03897 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.82■□□□□ 0.12
MT-ND3P03897 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
MT-ND3P03897 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MT-ND3P03897 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
MT-ND3P03897 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.82■□□□□ 0.12
MT-ND3P03897 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
MT-ND3P03897 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
MT-ND3P03897 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MT-ND3P03897 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
MT-ND3P03897 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MT-ND3P03897 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MT-ND3P03897 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MT-ND3P03897 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
MT-ND3P03897 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.82■□□□□ 0.12
MT-ND3P03897 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MT-ND3P03897 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
MT-ND3P03897 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MT-ND3P03897 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MT-ND3P03897 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
MT-ND3P03897 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MT-ND3P03897 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MT-ND3P03897 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
MT-ND3P03897 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
MT-ND3P03897 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.81■□□□□ 0.12
MT-ND3P03897 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
MT-ND3P03897 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.81■□□□□ 0.12
MT-ND3P03897 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
MT-ND3P03897 GPS2P2-201ENST00000430745 888 ntBASIC15.81■□□□□ 0.12
MT-ND3P03897 AL136982.4-201ENST00000437689 1740 ntBASIC15.81■□□□□ 0.12
MT-ND3P03897 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
MT-ND3P03897 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC15.81■□□□□ 0.12
MT-ND3P03897 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.81■□□□□ 0.12
MT-ND3P03897 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MT-ND3P03897 AC125807.1-201ENST00000483097 614 ntBASIC15.81■□□□□ 0.12
MT-ND3P03897 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
MT-ND3P03897 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
MT-ND3P03897 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.81■□□□□ 0.12
MT-ND3P03897 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.81■□□□□ 0.12
MT-ND3P03897 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
MT-ND3P03897 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
MT-ND3P03897 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.81■□□□□ 0.12
MT-ND3P03897 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
MT-ND3P03897 AC026150.2-201ENST00000564693 1156 ntBASIC15.81■□□□□ 0.12
MT-ND3P03897 AC140878.1-201ENST00000565277 250 ntBASIC15.81■□□□□ 0.12
MT-ND3P03897 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC15.81■□□□□ 0.12
MT-ND3P03897 AC027307.2-201ENST00000591252 911 ntBASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms