Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
RAPGEF3O95398 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC22.56■■□□□ 1.2
RAPGEF3O95398 AL137783.1-201ENST00000623494 1896 ntBASIC22.56■■□□□ 1.2
RAPGEF3O95398 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC22.56■■□□□ 1.2
RAPGEF3O95398 KRT18P9-201ENST00000604826 1300 ntBASIC22.56■■□□□ 1.2
RAPGEF3O95398 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RAPGEF3O95398 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
RAPGEF3O95398 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
RAPGEF3O95398 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC22.55■■□□□ 1.2
RAPGEF3O95398 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC22.55■■□□□ 1.2
RAPGEF3O95398 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RAPGEF3O95398 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
RAPGEF3O95398 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RAPGEF3O95398 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC22.55■■□□□ 1.2
RAPGEF3O95398 AL354861.1-201ENST00000445213 355 ntBASIC22.55■■□□□ 1.2
RAPGEF3O95398 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC22.55■■□□□ 1.2
RAPGEF3O95398 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC22.55■■□□□ 1.2
RAPGEF3O95398 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC22.55■■□□□ 1.2
RAPGEF3O95398 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC22.55■■□□□ 1.2
RAPGEF3O95398 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
RAPGEF3O95398 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
RAPGEF3O95398 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
RAPGEF3O95398 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
RAPGEF3O95398 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RAPGEF3O95398 KRT8P31-201ENST00000504812 1408 ntBASIC22.55■■□□□ 1.2
RAPGEF3O95398 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC22.55■■□□□ 1.2
RAPGEF3O95398 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RAPGEF3O95398 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RAPGEF3O95398 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RAPGEF3O95398 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RAPGEF3O95398 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
RAPGEF3O95398 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC22.55■■□□□ 1.2
RAPGEF3O95398 AC127383.1-201ENST00000444697 1800 ntBASIC22.54■■□□□ 1.2
RAPGEF3O95398 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
RAPGEF3O95398 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
RAPGEF3O95398 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
RAPGEF3O95398 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RAPGEF3O95398 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RAPGEF3O95398 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
RAPGEF3O95398 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RAPGEF3O95398 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RAPGEF3O95398 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RAPGEF3O95398 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RAPGEF3O95398 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC22.54■■□□□ 1.2
RAPGEF3O95398 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RAPGEF3O95398 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RAPGEF3O95398 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RAPGEF3O95398 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RAPGEF3O95398 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RAPGEF3O95398 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RAPGEF3O95398 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RAPGEF3O95398 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC22.54■■□□□ 1.2
RAPGEF3O95398 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RAPGEF3O95398 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC22.54■■□□□ 1.2
RAPGEF3O95398 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC22.54■■□□□ 1.2
RAPGEF3O95398 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC22.54■■□□□ 1.2
RAPGEF3O95398 AC093909.3-201ENST00000504783 336 ntBASIC22.54■■□□□ 1.2
RAPGEF3O95398 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC22.54■■□□□ 1.2
RAPGEF3O95398 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
RAPGEF3O95398 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC22.54■■□□□ 1.2
RAPGEF3O95398 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC22.54■■□□□ 1.2
RAPGEF3O95398 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC22.54■■□□□ 1.2
RAPGEF3O95398 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC22.54■■□□□ 1.2
RAPGEF3O95398 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC22.54■■□□□ 1.2
RAPGEF3O95398 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RAPGEF3O95398 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC22.54■■□□□ 1.2
RAPGEF3O95398 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
RAPGEF3O95398 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC22.54■■□□□ 1.2
RAPGEF3O95398 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC22.54■■□□□ 1.2
RAPGEF3O95398 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
RAPGEF3O95398 AL138725.1-201ENST00000407347 1314 ntBASIC22.54■■□□□ 1.2
RAPGEF3O95398 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC22.54■■□□□ 1.2
RAPGEF3O95398 TNRC18P3-201ENST00000441896 2691 ntBASIC22.54■■□□□ 1.2
RAPGEF3O95398 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
RAPGEF3O95398 USP4-203ENST00000415188 1454 ntTSL 3 BASIC22.54■■□□□ 1.2
RAPGEF3O95398 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RAPGEF3O95398 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC22.53■■□□□ 1.2
RAPGEF3O95398 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC22.53■■□□□ 1.2
RAPGEF3O95398 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
RAPGEF3O95398 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
RAPGEF3O95398 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RAPGEF3O95398 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RAPGEF3O95398 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RAPGEF3O95398 SLC9A7P1-202ENST00000556476 2239 ntBASIC22.53■■□□□ 1.2
RAPGEF3O95398 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC22.53■■□□□ 1.2
RAPGEF3O95398 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RAPGEF3O95398 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RAPGEF3O95398 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
RAPGEF3O95398 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC22.53■■□□□ 1.2
RAPGEF3O95398 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RAPGEF3O95398 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RAPGEF3O95398 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC22.53■■□□□ 1.2
RAPGEF3O95398 TSPY25P-201ENST00000429463 745 ntBASIC22.53■■□□□ 1.2
RAPGEF3O95398 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC22.53■■□□□ 1.2
RAPGEF3O95398 SKA2-202ENST00000437036 625 ntTSL 2 BASIC22.53■■□□□ 1.2
RAPGEF3O95398 AL645933.1-201ENST00000440087 609 ntBASIC22.53■■□□□ 1.2
RAPGEF3O95398 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC22.53■■□□□ 1.2
RAPGEF3O95398 RN7SL470P-201ENST00000583069 259 ntBASIC22.53■■□□□ 1.2
RAPGEF3O95398 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC22.53■■□□□ 1.2
RAPGEF3O95398 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms