Protein–RNA interactions for Protein: O60479

DLX3, Homeobox protein DLX-3, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DLX3O60479 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
DLX3O60479 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
DLX3O60479 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
DLX3O60479 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
DLX3O60479 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
DLX3O60479 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
DLX3O60479 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
DLX3O60479 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
DLX3O60479 INTS4P1-203ENST00000641008 3683 ntBASIC15.16■□□□□ 0.02
DLX3O60479 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
DLX3O60479 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
DLX3O60479 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
DLX3O60479 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
DLX3O60479 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
DLX3O60479 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
DLX3O60479 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
DLX3O60479 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.16■□□□□ 0.02
DLX3O60479 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
DLX3O60479 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.16■□□□□ 0.02
DLX3O60479 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
DLX3O60479 PKD1P5-201ENST00000532415 10291 ntBASIC15.16■□□□□ 0.02
DLX3O60479 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
DLX3O60479 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
DLX3O60479 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
DLX3O60479 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
DLX3O60479 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.16■□□□□ 0.02
DLX3O60479 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
DLX3O60479 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.16■□□□□ 0.02
DLX3O60479 AC015922.1-201ENST00000421102 1152 ntBASIC15.16■□□□□ 0.02
DLX3O60479 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.16■□□□□ 0.02
DLX3O60479 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.16■□□□□ 0.02
DLX3O60479 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.16■□□□□ 0.02
DLX3O60479 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
DLX3O60479 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
DLX3O60479 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
DLX3O60479 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.16■□□□□ 0.02
DLX3O60479 LINC01115-203ENST00000606068 577 ntBASIC15.16■□□□□ 0.02
DLX3O60479 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.16■□□□□ 0.02
DLX3O60479 AL645728.2-202ENST00000641679 227 ntBASIC15.16■□□□□ 0.02
DLX3O60479 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
DLX3O60479 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
DLX3O60479 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
DLX3O60479 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
DLX3O60479 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
DLX3O60479 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
DLX3O60479 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.16■□□□□ 0.02
DLX3O60479 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
DLX3O60479 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
DLX3O60479 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
DLX3O60479 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
DLX3O60479 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.16■□□□□ 0.02
DLX3O60479 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
DLX3O60479 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
DLX3O60479 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
DLX3O60479 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
DLX3O60479 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
DLX3O60479 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
DLX3O60479 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
DLX3O60479 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.15■□□□□ 0.02
DLX3O60479 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.15■□□□□ 0.02
DLX3O60479 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
DLX3O60479 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
DLX3O60479 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
DLX3O60479 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
DLX3O60479 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
DLX3O60479 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
DLX3O60479 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
DLX3O60479 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
DLX3O60479 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.15■□□□□ 0.02
DLX3O60479 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
DLX3O60479 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
DLX3O60479 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
DLX3O60479 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
DLX3O60479 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.15■□□□□ 0.02
DLX3O60479 SPDYE7P-202ENST00000420373 878 ntBASIC15.15■□□□□ 0.02
DLX3O60479 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
DLX3O60479 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
DLX3O60479 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
DLX3O60479 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
DLX3O60479 SERBP1P3-201ENST00000459980 809 ntBASIC15.15■□□□□ 0.02
DLX3O60479 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
DLX3O60479 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.15■□□□□ 0.02
DLX3O60479 AC010327.4-202ENST00000591484 748 ntBASIC15.15■□□□□ 0.02
DLX3O60479 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
DLX3O60479 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.15■□□□□ 0.02
DLX3O60479 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
DLX3O60479 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
DLX3O60479 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.15■□□□□ 0.02
DLX3O60479 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
DLX3O60479 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
DLX3O60479 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
DLX3O60479 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
DLX3O60479 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
DLX3O60479 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.15■□□□□ 0.02
DLX3O60479 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
DLX3O60479 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
DLX3O60479 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
DLX3O60479 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
DLX3O60479 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
DLX3O60479 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms