Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RAI2Q9Y5P3 CICP11-201ENST00000434745 2827 ntBASIC15.63■□□□□ 0.09
RAI2Q9Y5P3 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
RAI2Q9Y5P3 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RAI2Q9Y5P3 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAI2Q9Y5P3 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAI2Q9Y5P3 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
RAI2Q9Y5P3 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
RAI2Q9Y5P3 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.63■□□□□ 0.09
RAI2Q9Y5P3 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAI2Q9Y5P3 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
RAI2Q9Y5P3 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RAI2Q9Y5P3 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
RAI2Q9Y5P3 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC15.63■□□□□ 0.09
RAI2Q9Y5P3 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAI2Q9Y5P3 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAI2Q9Y5P3 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAI2Q9Y5P3 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAI2Q9Y5P3 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
RAI2Q9Y5P3 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.63■□□□□ 0.09
RAI2Q9Y5P3 AL442647.2-201ENST00000429864 857 ntBASIC15.63■□□□□ 0.09
RAI2Q9Y5P3 GAPDHP40-201ENST00000505218 1006 ntBASIC15.63■□□□□ 0.09
RAI2Q9Y5P3 AC026410.3-201ENST00000514280 936 ntBASIC15.63■□□□□ 0.09
RAI2Q9Y5P3 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.63■□□□□ 0.09
RAI2Q9Y5P3 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
RAI2Q9Y5P3 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC15.63■□□□□ 0.09
RAI2Q9Y5P3 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
RAI2Q9Y5P3 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC15.63■□□□□ 0.09
RAI2Q9Y5P3 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.63■□□□□ 0.09
RAI2Q9Y5P3 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.63■□□□□ 0.09
RAI2Q9Y5P3 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.63■□□□□ 0.09
RAI2Q9Y5P3 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
RAI2Q9Y5P3 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
RAI2Q9Y5P3 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
RAI2Q9Y5P3 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAI2Q9Y5P3 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAI2Q9Y5P3 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.63■□□□□ 0.09
RAI2Q9Y5P3 INTS4P2-202ENST00000614726 2019 ntBASIC15.63■□□□□ 0.09
RAI2Q9Y5P3 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.63■□□□□ 0.09
RAI2Q9Y5P3 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAI2Q9Y5P3 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RAI2Q9Y5P3 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.63■□□□□ 0.09
RAI2Q9Y5P3 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
RAI2Q9Y5P3 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAI2Q9Y5P3 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAI2Q9Y5P3 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RAI2Q9Y5P3 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
RAI2Q9Y5P3 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.63■□□□□ 0.09
RAI2Q9Y5P3 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.63■□□□□ 0.09
RAI2Q9Y5P3 KRT8P44-201ENST00000441609 1350 ntBASIC15.62■□□□□ 0.09
RAI2Q9Y5P3 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.62■□□□□ 0.09
RAI2Q9Y5P3 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.62■□□□□ 0.09
RAI2Q9Y5P3 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.62■□□□□ 0.09
RAI2Q9Y5P3 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.62■□□□□ 0.09
RAI2Q9Y5P3 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAI2Q9Y5P3 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RAI2Q9Y5P3 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAI2Q9Y5P3 AC138035.3-201ENST00000622706 2791 ntBASIC15.62■□□□□ 0.09
RAI2Q9Y5P3 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
RAI2Q9Y5P3 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RAI2Q9Y5P3 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.62■□□□□ 0.09
RAI2Q9Y5P3 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.62■□□□□ 0.09
RAI2Q9Y5P3 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAI2Q9Y5P3 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.62■□□□□ 0.09
RAI2Q9Y5P3 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RAI2Q9Y5P3 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC15.62■□□□□ 0.09
RAI2Q9Y5P3 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RAI2Q9Y5P3 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.62■□□□□ 0.09
RAI2Q9Y5P3 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RAI2Q9Y5P3 AC134915.1-201ENST00000426461 574 ntBASIC15.62■□□□□ 0.09
RAI2Q9Y5P3 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
RAI2Q9Y5P3 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RAI2Q9Y5P3 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.62■□□□□ 0.09
RAI2Q9Y5P3 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAI2Q9Y5P3 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.62■□□□□ 0.09
RAI2Q9Y5P3 AL512343.1-201ENST00000605837 169 ntBASIC15.62■□□□□ 0.09
RAI2Q9Y5P3 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.62■□□□□ 0.09
RAI2Q9Y5P3 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RAI2Q9Y5P3 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAI2Q9Y5P3 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC15.62■□□□□ 0.09
RAI2Q9Y5P3 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
RAI2Q9Y5P3 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAI2Q9Y5P3 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RAI2Q9Y5P3 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.62■□□□□ 0.09
RAI2Q9Y5P3 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.62■□□□□ 0.09
RAI2Q9Y5P3 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAI2Q9Y5P3 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
RAI2Q9Y5P3 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAI2Q9Y5P3 AC148477.4-201ENST00000613430 1793 ntBASIC15.62■□□□□ 0.09
RAI2Q9Y5P3 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RAI2Q9Y5P3 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.61■□□□□ 0.09
RAI2Q9Y5P3 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
RAI2Q9Y5P3 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAI2Q9Y5P3 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAI2Q9Y5P3 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RAI2Q9Y5P3 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAI2Q9Y5P3 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.61■□□□□ 0.09
RAI2Q9Y5P3 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
RAI2Q9Y5P3 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RAI2Q9Y5P3 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms