Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RPH3AQ9Y2J0 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.27□□□□□ -0.12
RPH3AQ9Y2J0 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.27□□□□□ -0.12
RPH3AQ9Y2J0 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
RPH3AQ9Y2J0 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RPH3AQ9Y2J0 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RPH3AQ9Y2J0 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
RPH3AQ9Y2J0 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC14.27□□□□□ -0.13
RPH3AQ9Y2J0 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RPH3AQ9Y2J0 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RPH3AQ9Y2J0 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.27□□□□□ -0.13
RPH3AQ9Y2J0 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RPH3AQ9Y2J0 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC14.27□□□□□ -0.13
RPH3AQ9Y2J0 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
RPH3AQ9Y2J0 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
RPH3AQ9Y2J0 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.27□□□□□ -0.13
RPH3AQ9Y2J0 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
RPH3AQ9Y2J0 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
RPH3AQ9Y2J0 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC14.27□□□□□ -0.13
RPH3AQ9Y2J0 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.27□□□□□ -0.13
RPH3AQ9Y2J0 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
RPH3AQ9Y2J0 GPR53P-205ENST00000457298 1084 ntBASIC14.27□□□□□ -0.13
RPH3AQ9Y2J0 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC14.27□□□□□ -0.13
RPH3AQ9Y2J0 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.27□□□□□ -0.13
RPH3AQ9Y2J0 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.27□□□□□ -0.13
RPH3AQ9Y2J0 IFT20-216ENST00000588477 774 ntTSL 5 BASIC14.27□□□□□ -0.13
RPH3AQ9Y2J0 AC084346.2-201ENST00000607097 949 ntBASIC14.27□□□□□ -0.13
RPH3AQ9Y2J0 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.27□□□□□ -0.13
RPH3AQ9Y2J0 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.27□□□□□ -0.13
RPH3AQ9Y2J0 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RPH3AQ9Y2J0 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.27□□□□□ -0.13
RPH3AQ9Y2J0 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.27□□□□□ -0.13
RPH3AQ9Y2J0 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RPH3AQ9Y2J0 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.27□□□□□ -0.13
RPH3AQ9Y2J0 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
RPH3AQ9Y2J0 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
RPH3AQ9Y2J0 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
RPH3AQ9Y2J0 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.26□□□□□ -0.13
RPH3AQ9Y2J0 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.26□□□□□ -0.13
RPH3AQ9Y2J0 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
RPH3AQ9Y2J0 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RPH3AQ9Y2J0 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RPH3AQ9Y2J0 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RPH3AQ9Y2J0 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RPH3AQ9Y2J0 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RPH3AQ9Y2J0 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RPH3AQ9Y2J0 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
RPH3AQ9Y2J0 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.26□□□□□ -0.13
RPH3AQ9Y2J0 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RPH3AQ9Y2J0 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RPH3AQ9Y2J0 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
RPH3AQ9Y2J0 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
RPH3AQ9Y2J0 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RPH3AQ9Y2J0 DFFBP1-201ENST00000433250 979 ntBASIC14.26□□□□□ -0.13
RPH3AQ9Y2J0 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC14.26□□□□□ -0.13
RPH3AQ9Y2J0 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.26□□□□□ -0.13
RPH3AQ9Y2J0 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.26□□□□□ -0.13
RPH3AQ9Y2J0 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.26□□□□□ -0.13
RPH3AQ9Y2J0 AC055876.2-201ENST00000531834 546 ntBASIC14.26□□□□□ -0.13
RPH3AQ9Y2J0 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14.26□□□□□ -0.13
RPH3AQ9Y2J0 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.26□□□□□ -0.13
RPH3AQ9Y2J0 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.26□□□□□ -0.13
RPH3AQ9Y2J0 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.26□□□□□ -0.13
RPH3AQ9Y2J0 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
RPH3AQ9Y2J0 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
RPH3AQ9Y2J0 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RPH3AQ9Y2J0 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RPH3AQ9Y2J0 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RPH3AQ9Y2J0 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
RPH3AQ9Y2J0 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RPH3AQ9Y2J0 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.26□□□□□ -0.13
RPH3AQ9Y2J0 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
RPH3AQ9Y2J0 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RPH3AQ9Y2J0 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.26□□□□□ -0.13
RPH3AQ9Y2J0 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.26□□□□□ -0.13
RPH3AQ9Y2J0 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.26□□□□□ -0.13
RPH3AQ9Y2J0 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.26□□□□□ -0.13
RPH3AQ9Y2J0 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RPH3AQ9Y2J0 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.25□□□□□ -0.13
RPH3AQ9Y2J0 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.25□□□□□ -0.13
RPH3AQ9Y2J0 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RPH3AQ9Y2J0 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RPH3AQ9Y2J0 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
RPH3AQ9Y2J0 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RPH3AQ9Y2J0 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RPH3AQ9Y2J0 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RPH3AQ9Y2J0 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RPH3AQ9Y2J0 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RPH3AQ9Y2J0 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
RPH3AQ9Y2J0 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
RPH3AQ9Y2J0 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.25□□□□□ -0.13
RPH3AQ9Y2J0 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RPH3AQ9Y2J0 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RPH3AQ9Y2J0 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.25□□□□□ -0.13
RPH3AQ9Y2J0 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
RPH3AQ9Y2J0 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RPH3AQ9Y2J0 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RPH3AQ9Y2J0 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RPH3AQ9Y2J0 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RPH3AQ9Y2J0 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms