Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HOXC10Q9NYD6 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC17.53■□□□□ 0.4
HOXC10Q9NYD6 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HOXC10Q9NYD6 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HOXC10Q9NYD6 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.53■□□□□ 0.4
HOXC10Q9NYD6 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
HOXC10Q9NYD6 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HOXC10Q9NYD6 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.52■□□□□ 0.4
HOXC10Q9NYD6 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HOXC10Q9NYD6 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.52■□□□□ 0.4
HOXC10Q9NYD6 REXO1L5P-201ENST00000622260 2098 ntBASIC17.52■□□□□ 0.4
HOXC10Q9NYD6 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HOXC10Q9NYD6 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HOXC10Q9NYD6 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
HOXC10Q9NYD6 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
HOXC10Q9NYD6 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HOXC10Q9NYD6 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HOXC10Q9NYD6 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HOXC10Q9NYD6 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HOXC10Q9NYD6 CLUHP2-201ENST00000426660 1303 ntBASIC17.52■□□□□ 0.4
HOXC10Q9NYD6 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HOXC10Q9NYD6 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HOXC10Q9NYD6 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HOXC10Q9NYD6 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC17.52■□□□□ 0.4
HOXC10Q9NYD6 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
HOXC10Q9NYD6 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
HOXC10Q9NYD6 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HOXC10Q9NYD6 AC004945.1-201ENST00000416738 983 ntBASIC17.52■□□□□ 0.4
HOXC10Q9NYD6 HLA-K-203ENST00000430151 1046 ntBASIC17.52■□□□□ 0.4
HOXC10Q9NYD6 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC17.52■□□□□ 0.4
HOXC10Q9NYD6 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC17.52■□□□□ 0.4
HOXC10Q9NYD6 SERPINA13P-202ENST00000478994 924 ntBASIC17.52■□□□□ 0.4
HOXC10Q9NYD6 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
HOXC10Q9NYD6 HIST2H2BC-201ENST00000498492 580 ntBASIC17.52■□□□□ 0.4
HOXC10Q9NYD6 AC100850.1-201ENST00000506768 649 ntBASIC17.52■□□□□ 0.4
HOXC10Q9NYD6 AP003171.2-201ENST00000528208 925 ntBASIC17.52■□□□□ 0.4
HOXC10Q9NYD6 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC17.52■□□□□ 0.4
HOXC10Q9NYD6 NDUFV2P1-201ENST00000596415 907 ntBASIC17.52■□□□□ 0.4
HOXC10Q9NYD6 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HOXC10Q9NYD6 AP001002.3-201ENST00000623482 206 ntBASIC17.52■□□□□ 0.4
HOXC10Q9NYD6 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC17.52■□□□□ 0.4
HOXC10Q9NYD6 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HOXC10Q9NYD6 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
HOXC10Q9NYD6 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
HOXC10Q9NYD6 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
HOXC10Q9NYD6 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
HOXC10Q9NYD6 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HOXC10Q9NYD6 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
HOXC10Q9NYD6 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
HOXC10Q9NYD6 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
HOXC10Q9NYD6 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC17.52■□□□□ 0.39
HOXC10Q9NYD6 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.52■□□□□ 0.39
HOXC10Q9NYD6 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
HOXC10Q9NYD6 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
HOXC10Q9NYD6 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC17.52■□□□□ 0.39
HOXC10Q9NYD6 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HOXC10Q9NYD6 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.52■□□□□ 0.39
HOXC10Q9NYD6 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
HOXC10Q9NYD6 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HOXC10Q9NYD6 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
HOXC10Q9NYD6 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.52■□□□□ 0.39
HOXC10Q9NYD6 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
HOXC10Q9NYD6 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HOXC10Q9NYD6 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
HOXC10Q9NYD6 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HOXC10Q9NYD6 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
HOXC10Q9NYD6 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HOXC10Q9NYD6 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
HOXC10Q9NYD6 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.51■□□□□ 0.39
HOXC10Q9NYD6 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HOXC10Q9NYD6 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
HOXC10Q9NYD6 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HOXC10Q9NYD6 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HOXC10Q9NYD6 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.51■□□□□ 0.39
HOXC10Q9NYD6 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
HOXC10Q9NYD6 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
HOXC10Q9NYD6 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HOXC10Q9NYD6 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC17.51■□□□□ 0.39
HOXC10Q9NYD6 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC17.51■□□□□ 0.39
HOXC10Q9NYD6 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC17.51■□□□□ 0.39
HOXC10Q9NYD6 HIST2H2BB-201ENST00000449108 381 ntBASIC17.51■□□□□ 0.39
HOXC10Q9NYD6 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
HOXC10Q9NYD6 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.51■□□□□ 0.39
HOXC10Q9NYD6 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC17.51■□□□□ 0.39
HOXC10Q9NYD6 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
HOXC10Q9NYD6 AL021578.1-201ENST00000613646 709 ntBASIC17.51■□□□□ 0.39
HOXC10Q9NYD6 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
HOXC10Q9NYD6 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
HOXC10Q9NYD6 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
HOXC10Q9NYD6 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HOXC10Q9NYD6 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HOXC10Q9NYD6 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.51■□□□□ 0.39
HOXC10Q9NYD6 CICP13-201ENST00000422015 2789 ntBASIC17.51■□□□□ 0.39
HOXC10Q9NYD6 AL360270.3-201ENST00000609118 1348 ntBASIC17.5■□□□□ 0.39
HOXC10Q9NYD6 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HOXC10Q9NYD6 LTB4R2-202ENST00000528054 3092 ntBASIC17.5■□□□□ 0.39
HOXC10Q9NYD6 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
HOXC10Q9NYD6 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.5■□□□□ 0.39
HOXC10Q9NYD6 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HOXC10Q9NYD6 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms