Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCM2LQ9NUG4 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.79□□□□□ -0.04
CCM2LQ9NUG4 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.79□□□□□ -0.04
CCM2LQ9NUG4 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCM2LQ9NUG4 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.79□□□□□ -0.04
CCM2LQ9NUG4 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.79□□□□□ -0.04
CCM2LQ9NUG4 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CCM2LQ9NUG4 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCM2LQ9NUG4 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.79□□□□□ -0.04
CCM2LQ9NUG4 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CCM2LQ9NUG4 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CCM2LQ9NUG4 AL513480.1-201ENST00000451731 511 ntBASIC14.79□□□□□ -0.04
CCM2LQ9NUG4 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.79□□□□□ -0.04
CCM2LQ9NUG4 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.79□□□□□ -0.04
CCM2LQ9NUG4 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.79□□□□□ -0.04
CCM2LQ9NUG4 AC067863.1-201ENST00000494933 530 ntBASIC14.79□□□□□ -0.04
CCM2LQ9NUG4 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.79□□□□□ -0.04
CCM2LQ9NUG4 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.79□□□□□ -0.04
CCM2LQ9NUG4 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.79□□□□□ -0.04
CCM2LQ9NUG4 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC14.79□□□□□ -0.04
CCM2LQ9NUG4 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CCM2LQ9NUG4 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.79□□□□□ -0.04
CCM2LQ9NUG4 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.79□□□□□ -0.04
CCM2LQ9NUG4 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CCM2LQ9NUG4 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCM2LQ9NUG4 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.79□□□□□ -0.04
CCM2LQ9NUG4 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.79□□□□□ -0.04
CCM2LQ9NUG4 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.79□□□□□ -0.04
CCM2LQ9NUG4 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.79□□□□□ -0.04
CCM2LQ9NUG4 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CCM2LQ9NUG4 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.79□□□□□ -0.04
CCM2LQ9NUG4 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CCM2LQ9NUG4 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CCM2LQ9NUG4 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCM2LQ9NUG4 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.79□□□□□ -0.04
CCM2LQ9NUG4 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CCM2LQ9NUG4 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCM2LQ9NUG4 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCM2LQ9NUG4 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CCM2LQ9NUG4 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCM2LQ9NUG4 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.78□□□□□ -0.04
CCM2LQ9NUG4 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCM2LQ9NUG4 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CCM2LQ9NUG4 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.78□□□□□ -0.04
CCM2LQ9NUG4 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCM2LQ9NUG4 AC126755.1-201ENST00000525846 6405 ntBASIC14.78□□□□□ -0.04
CCM2LQ9NUG4 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CCM2LQ9NUG4 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CCM2LQ9NUG4 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCM2LQ9NUG4 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
CCM2LQ9NUG4 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCM2LQ9NUG4 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCM2LQ9NUG4 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCM2LQ9NUG4 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.78□□□□□ -0.04
CCM2LQ9NUG4 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
CCM2LQ9NUG4 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.78□□□□□ -0.04
CCM2LQ9NUG4 GSAP-205ENST00000430584 600 ntTSL 5 BASIC14.78□□□□□ -0.04
CCM2LQ9NUG4 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CCM2LQ9NUG4 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.78□□□□□ -0.04
CCM2LQ9NUG4 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCM2LQ9NUG4 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.78□□□□□ -0.04
CCM2LQ9NUG4 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.78□□□□□ -0.04
CCM2LQ9NUG4 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.78□□□□□ -0.04
CCM2LQ9NUG4 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCM2LQ9NUG4 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.78□□□□□ -0.04
CCM2LQ9NUG4 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.78□□□□□ -0.04
CCM2LQ9NUG4 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCM2LQ9NUG4 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCM2LQ9NUG4 AC012645.4-201ENST00000610691 1061 ntBASIC14.78□□□□□ -0.04
CCM2LQ9NUG4 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCM2LQ9NUG4 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.78□□□□□ -0.04
CCM2LQ9NUG4 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCM2LQ9NUG4 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCM2LQ9NUG4 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.78□□□□□ -0.04
CCM2LQ9NUG4 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
CCM2LQ9NUG4 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
CCM2LQ9NUG4 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCM2LQ9NUG4 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.78□□□□□ -0.04
CCM2LQ9NUG4 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.78□□□□□ -0.04
CCM2LQ9NUG4 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
CCM2LQ9NUG4 LINC01230-201ENST00000625222 3017 ntBASIC14.78□□□□□ -0.04
CCM2LQ9NUG4 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCM2LQ9NUG4 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCM2LQ9NUG4 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCM2LQ9NUG4 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCM2LQ9NUG4 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CCM2LQ9NUG4 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCM2LQ9NUG4 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CCM2LQ9NUG4 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.78□□□□□ -0.04
CCM2LQ9NUG4 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CCM2LQ9NUG4 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.78□□□□□ -0.04
CCM2LQ9NUG4 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCM2LQ9NUG4 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCM2LQ9NUG4 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CCM2LQ9NUG4 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCM2LQ9NUG4 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCM2LQ9NUG4 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCM2LQ9NUG4 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCM2LQ9NUG4 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.78□□□□□ -0.04
CCM2LQ9NUG4 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms