Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC16.02■□□□□ 0.16
HPS4Q9NQG7 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16.02■□□□□ 0.16
HPS4Q9NQG7 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.02■□□□□ 0.16
HPS4Q9NQG7 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HPS4Q9NQG7 SNX12-206ENST00000622259 661 ntTSL 5 BASIC16.02■□□□□ 0.16
HPS4Q9NQG7 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC16.02■□□□□ 0.16
HPS4Q9NQG7 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.02■□□□□ 0.16
HPS4Q9NQG7 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
HPS4Q9NQG7 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
HPS4Q9NQG7 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HPS4Q9NQG7 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
HPS4Q9NQG7 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HPS4Q9NQG7 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC16.02■□□□□ 0.15
HPS4Q9NQG7 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
HPS4Q9NQG7 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
HPS4Q9NQG7 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HPS4Q9NQG7 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.02■□□□□ 0.15
HPS4Q9NQG7 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
HPS4Q9NQG7 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
HPS4Q9NQG7 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
HPS4Q9NQG7 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.02■□□□□ 0.15
HPS4Q9NQG7 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
HPS4Q9NQG7 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
HPS4Q9NQG7 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.02■□□□□ 0.15
HPS4Q9NQG7 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
HPS4Q9NQG7 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.01■□□□□ 0.15
HPS4Q9NQG7 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HPS4Q9NQG7 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HPS4Q9NQG7 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HPS4Q9NQG7 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.01■□□□□ 0.15
HPS4Q9NQG7 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HPS4Q9NQG7 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HPS4Q9NQG7 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
HPS4Q9NQG7 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.01■□□□□ 0.15
HPS4Q9NQG7 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
HPS4Q9NQG7 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HPS4Q9NQG7 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HPS4Q9NQG7 AL133338.1-201ENST00000565695 1517 ntBASIC16.01■□□□□ 0.15
HPS4Q9NQG7 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.01■□□□□ 0.15
HPS4Q9NQG7 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HPS4Q9NQG7 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
HPS4Q9NQG7 CNN2P8-201ENST00000421872 913 ntBASIC16.01■□□□□ 0.15
HPS4Q9NQG7 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
HPS4Q9NQG7 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HPS4Q9NQG7 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC16.01■□□□□ 0.15
HPS4Q9NQG7 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HPS4Q9NQG7 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC16.01■□□□□ 0.15
HPS4Q9NQG7 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC16.01■□□□□ 0.15
HPS4Q9NQG7 AC025279.2-201ENST00000569730 653 ntBASIC16.01■□□□□ 0.15
HPS4Q9NQG7 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HPS4Q9NQG7 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC16.01■□□□□ 0.15
HPS4Q9NQG7 AC010328.2-201ENST00000597698 1111 ntBASIC16.01■□□□□ 0.15
HPS4Q9NQG7 AC008687.7-202ENST00000637404 953 ntBASIC16.01■□□□□ 0.15
HPS4Q9NQG7 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.01■□□□□ 0.15
HPS4Q9NQG7 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC16.01■□□□□ 0.15
HPS4Q9NQG7 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
HPS4Q9NQG7 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.01■□□□□ 0.15
HPS4Q9NQG7 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HPS4Q9NQG7 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.01■□□□□ 0.15
HPS4Q9NQG7 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HPS4Q9NQG7 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HPS4Q9NQG7 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
HPS4Q9NQG7 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
HPS4Q9NQG7 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HPS4Q9NQG7 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC16■□□□□ 0.15
HPS4Q9NQG7 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HPS4Q9NQG7 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16■□□□□ 0.15
HPS4Q9NQG7 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HPS4Q9NQG7 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16■□□□□ 0.15
HPS4Q9NQG7 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16■□□□□ 0.15
HPS4Q9NQG7 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
HPS4Q9NQG7 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
HPS4Q9NQG7 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HPS4Q9NQG7 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
HPS4Q9NQG7 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HPS4Q9NQG7 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HPS4Q9NQG7 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HPS4Q9NQG7 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16■□□□□ 0.15
HPS4Q9NQG7 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16■□□□□ 0.15
HPS4Q9NQG7 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HPS4Q9NQG7 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC16■□□□□ 0.15
HPS4Q9NQG7 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC16■□□□□ 0.15
HPS4Q9NQG7 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16■□□□□ 0.15
HPS4Q9NQG7 TPO-206ENST00000382269 1155 ntTSL 5 BASIC16■□□□□ 0.15
HPS4Q9NQG7 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16■□□□□ 0.15
HPS4Q9NQG7 C2orf27AP3-201ENST00000434123 579 ntBASIC16■□□□□ 0.15
HPS4Q9NQG7 RPL13AP20-201ENST00000459725 609 ntBASIC16■□□□□ 0.15
HPS4Q9NQG7 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC16■□□□□ 0.15
HPS4Q9NQG7 CD74-212ENST00000524315 584 ntTSL 5 BASIC16■□□□□ 0.15
HPS4Q9NQG7 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16■□□□□ 0.15
HPS4Q9NQG7 LARP4-220ENST00000615080 856 ntTSL 5 BASIC16■□□□□ 0.15
HPS4Q9NQG7 AL354718.3-201ENST00000616414 581 ntBASIC16■□□□□ 0.15
HPS4Q9NQG7 CR382287.1-201ENST00000623954 586 ntBASIC16■□□□□ 0.15
HPS4Q9NQG7 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
HPS4Q9NQG7 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
HPS4Q9NQG7 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HPS4Q9NQG7 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16■□□□□ 0.15
HPS4Q9NQG7 PAUPAR-201ENST00000630360 2965 ntBASIC16■□□□□ 0.15
HPS4Q9NQG7 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16■□□□□ 0.15
HPS4Q9NQG7 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms