Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HMG20AQ9NP66 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HMG20AQ9NP66 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
HMG20AQ9NP66 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HMG20AQ9NP66 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HMG20AQ9NP66 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC14.16□□□□□ -0.14
HMG20AQ9NP66 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
HMG20AQ9NP66 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC14.16□□□□□ -0.14
HMG20AQ9NP66 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC14.15□□□□□ -0.14
HMG20AQ9NP66 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC14.15□□□□□ -0.14
HMG20AQ9NP66 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.15□□□□□ -0.14
HMG20AQ9NP66 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HMG20AQ9NP66 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HMG20AQ9NP66 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
HMG20AQ9NP66 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC14.15□□□□□ -0.14
HMG20AQ9NP66 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HMG20AQ9NP66 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.15□□□□□ -0.14
HMG20AQ9NP66 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
HMG20AQ9NP66 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HMG20AQ9NP66 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC14.15□□□□□ -0.14
HMG20AQ9NP66 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.15□□□□□ -0.14
HMG20AQ9NP66 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HMG20AQ9NP66 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.15□□□□□ -0.14
HMG20AQ9NP66 AC018712.1-201ENST00000455767 687 ntBASIC14.15□□□□□ -0.14
HMG20AQ9NP66 AF186996.4-201ENST00000467186 377 ntBASIC14.15□□□□□ -0.14
HMG20AQ9NP66 IGHV3-65-201ENST00000523210 341 ntBASIC14.15□□□□□ -0.14
HMG20AQ9NP66 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
HMG20AQ9NP66 AC005412.3-201ENST00000580309 715 ntBASIC14.15□□□□□ -0.14
HMG20AQ9NP66 CYP2A7P1-201ENST00000595391 815 ntBASIC14.15□□□□□ -0.14
HMG20AQ9NP66 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HMG20AQ9NP66 AL356488.2-201ENST00000602755 427 ntBASIC14.15□□□□□ -0.14
HMG20AQ9NP66 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HMG20AQ9NP66 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.15□□□□□ -0.14
HMG20AQ9NP66 AP001350.2-201ENST00000625104 1094 ntBASIC14.15□□□□□ -0.14
HMG20AQ9NP66 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
HMG20AQ9NP66 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HMG20AQ9NP66 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HMG20AQ9NP66 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
HMG20AQ9NP66 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HMG20AQ9NP66 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HMG20AQ9NP66 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HMG20AQ9NP66 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC14.15□□□□□ -0.14
HMG20AQ9NP66 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
HMG20AQ9NP66 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
HMG20AQ9NP66 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
HMG20AQ9NP66 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.15□□□□□ -0.14
HMG20AQ9NP66 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
HMG20AQ9NP66 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC14.15□□□□□ -0.14
HMG20AQ9NP66 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.15□□□□□ -0.14
HMG20AQ9NP66 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
HMG20AQ9NP66 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HMG20AQ9NP66 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
HMG20AQ9NP66 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HMG20AQ9NP66 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.14□□□□□ -0.15
HMG20AQ9NP66 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HMG20AQ9NP66 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HMG20AQ9NP66 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
HMG20AQ9NP66 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC14.14□□□□□ -0.15
HMG20AQ9NP66 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HMG20AQ9NP66 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HMG20AQ9NP66 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.14□□□□□ -0.15
HMG20AQ9NP66 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.14□□□□□ -0.15
HMG20AQ9NP66 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
HMG20AQ9NP66 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.14□□□□□ -0.15
HMG20AQ9NP66 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
HMG20AQ9NP66 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HMG20AQ9NP66 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HMG20AQ9NP66 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HMG20AQ9NP66 CTBP1-AS2-206ENST00000581398 5652 ntBASIC14.14□□□□□ -0.15
HMG20AQ9NP66 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HMG20AQ9NP66 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HMG20AQ9NP66 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
HMG20AQ9NP66 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
HMG20AQ9NP66 RPS2P28-201ENST00000314255 741 ntBASIC14.14□□□□□ -0.15
HMG20AQ9NP66 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC14.14□□□□□ -0.15
HMG20AQ9NP66 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HMG20AQ9NP66 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HMG20AQ9NP66 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
HMG20AQ9NP66 KRT18P67-201ENST00000432816 1264 ntBASIC14.14□□□□□ -0.15
HMG20AQ9NP66 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC14.14□□□□□ -0.15
HMG20AQ9NP66 HNRNPDP1-201ENST00000439535 754 ntBASIC14.14□□□□□ -0.15
HMG20AQ9NP66 DUSP5P1-201ENST00000441325 1139 ntBASIC14.14□□□□□ -0.15
HMG20AQ9NP66 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.14□□□□□ -0.15
HMG20AQ9NP66 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
HMG20AQ9NP66 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.14□□□□□ -0.15
HMG20AQ9NP66 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC14.14□□□□□ -0.15
HMG20AQ9NP66 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC14.14□□□□□ -0.15
HMG20AQ9NP66 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC14.14□□□□□ -0.15
HMG20AQ9NP66 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
HMG20AQ9NP66 MST1P2-201ENST00000457982 2291 ntBASIC14.14□□□□□ -0.15
HMG20AQ9NP66 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
HMG20AQ9NP66 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
HMG20AQ9NP66 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HMG20AQ9NP66 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HMG20AQ9NP66 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HMG20AQ9NP66 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
HMG20AQ9NP66 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.14□□□□□ -0.15
HMG20AQ9NP66 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HMG20AQ9NP66 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HMG20AQ9NP66 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms