Protein–RNA interactions for Protein: Q96TA2

YME1L1, ATP-dependent zinc metalloprotease YME1L1, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YME1L1Q96TA2 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
YME1L1Q96TA2 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
YME1L1Q96TA2 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
YME1L1Q96TA2 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
YME1L1Q96TA2 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC16.5■□□□□ 0.23
YME1L1Q96TA2 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
YME1L1Q96TA2 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
YME1L1Q96TA2 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
YME1L1Q96TA2 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
YME1L1Q96TA2 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.49■□□□□ 0.23
YME1L1Q96TA2 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
YME1L1Q96TA2 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
YME1L1Q96TA2 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
YME1L1Q96TA2 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
YME1L1Q96TA2 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
YME1L1Q96TA2 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.49■□□□□ 0.23
YME1L1Q96TA2 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
YME1L1Q96TA2 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.49■□□□□ 0.23
YME1L1Q96TA2 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
YME1L1Q96TA2 HLA-DQB2-229ENST00000411527 1059 ntBASIC16.49■□□□□ 0.23
YME1L1Q96TA2 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
YME1L1Q96TA2 PTPA-217ENST00000434095 870 ntTSL 2 BASIC16.49■□□□□ 0.23
YME1L1Q96TA2 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
YME1L1Q96TA2 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC16.49■□□□□ 0.23
YME1L1Q96TA2 AC005740.2-201ENST00000511085 419 ntBASIC16.49■□□□□ 0.23
YME1L1Q96TA2 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
YME1L1Q96TA2 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC16.49■□□□□ 0.23
YME1L1Q96TA2 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
YME1L1Q96TA2 AC005730.2-201ENST00000564549 1184 ntBASIC16.49■□□□□ 0.23
YME1L1Q96TA2 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
YME1L1Q96TA2 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
YME1L1Q96TA2 MIR4706-201ENST00000582134 82 ntBASIC16.49■□□□□ 0.23
YME1L1Q96TA2 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC16.49■□□□□ 0.23
YME1L1Q96TA2 AC073413.1-201ENST00000603927 732 ntBASIC16.49■□□□□ 0.23
YME1L1Q96TA2 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
YME1L1Q96TA2 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
YME1L1Q96TA2 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
YME1L1Q96TA2 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
YME1L1Q96TA2 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.49■□□□□ 0.23
YME1L1Q96TA2 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
YME1L1Q96TA2 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
YME1L1Q96TA2 AC022188.1-201ENST00000620960 1664 ntBASIC16.49■□□□□ 0.23
YME1L1Q96TA2 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
YME1L1Q96TA2 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
YME1L1Q96TA2 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
YME1L1Q96TA2 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.49■□□□□ 0.23
YME1L1Q96TA2 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
YME1L1Q96TA2 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC16.48■□□□□ 0.23
YME1L1Q96TA2 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
YME1L1Q96TA2 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
YME1L1Q96TA2 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
YME1L1Q96TA2 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.48■□□□□ 0.23
YME1L1Q96TA2 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
YME1L1Q96TA2 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
YME1L1Q96TA2 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
YME1L1Q96TA2 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
YME1L1Q96TA2 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
YME1L1Q96TA2 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
YME1L1Q96TA2 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
YME1L1Q96TA2 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.48■□□□□ 0.23
YME1L1Q96TA2 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
YME1L1Q96TA2 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
YME1L1Q96TA2 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
YME1L1Q96TA2 SDCCAG3P2-201ENST00000326105 1023 ntBASIC16.48■□□□□ 0.23
YME1L1Q96TA2 SMS-201ENST00000379404 1174 ntTSL 3 BASIC16.48■□□□□ 0.23
YME1L1Q96TA2 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC16.48■□□□□ 0.23
YME1L1Q96TA2 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
YME1L1Q96TA2 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
YME1L1Q96TA2 TMEM198B-204ENST00000484016 896 ntBASIC16.48■□□□□ 0.23
YME1L1Q96TA2 AC021723.1-201ENST00000486306 515 ntBASIC16.48■□□□□ 0.23
YME1L1Q96TA2 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC16.48■□□□□ 0.23
YME1L1Q96TA2 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC16.48■□□□□ 0.23
YME1L1Q96TA2 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC16.48■□□□□ 0.23
YME1L1Q96TA2 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC16.48■□□□□ 0.23
YME1L1Q96TA2 MIR4722-201ENST00000578292 60 ntBASIC16.48■□□□□ 0.23
YME1L1Q96TA2 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC16.48■□□□□ 0.23
YME1L1Q96TA2 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC16.48■□□□□ 0.23
YME1L1Q96TA2 AP001002.3-201ENST00000623482 206 ntBASIC16.48■□□□□ 0.23
YME1L1Q96TA2 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.48■□□□□ 0.23
YME1L1Q96TA2 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.48■□□□□ 0.23
YME1L1Q96TA2 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
YME1L1Q96TA2 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC16.48■□□□□ 0.23
YME1L1Q96TA2 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
YME1L1Q96TA2 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
YME1L1Q96TA2 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.48■□□□□ 0.23
YME1L1Q96TA2 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
YME1L1Q96TA2 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
YME1L1Q96TA2 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
YME1L1Q96TA2 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
YME1L1Q96TA2 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
YME1L1Q96TA2 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
YME1L1Q96TA2 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.47■□□□□ 0.23
YME1L1Q96TA2 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
YME1L1Q96TA2 FLJ16779-201ENST00000612722 7638 ntBASIC16.47■□□□□ 0.23
YME1L1Q96TA2 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.47■□□□□ 0.23
YME1L1Q96TA2 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
YME1L1Q96TA2 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
YME1L1Q96TA2 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.47■□□□□ 0.23
YME1L1Q96TA2 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
YME1L1Q96TA2 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms