Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
RAB40CQ96S21 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC12.6□□□□□ -0.39
RAB40CQ96S21 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RAB40CQ96S21 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
RAB40CQ96S21 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC12.6□□□□□ -0.39
RAB40CQ96S21 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC12.6□□□□□ -0.39
RAB40CQ96S21 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC12.6□□□□□ -0.39
RAB40CQ96S21 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
RAB40CQ96S21 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RAB40CQ96S21 AC027601.5-201ENST00000624065 2482 ntBASIC12.6□□□□□ -0.39
RAB40CQ96S21 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC12.6□□□□□ -0.39
RAB40CQ96S21 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RAB40CQ96S21 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC12.6□□□□□ -0.39
RAB40CQ96S21 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
RAB40CQ96S21 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
RAB40CQ96S21 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC12.6□□□□□ -0.39
RAB40CQ96S21 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC12.6□□□□□ -0.39
RAB40CQ96S21 IGLL3P-201ENST00000412472 434 ntBASIC12.6□□□□□ -0.39
RAB40CQ96S21 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC12.6□□□□□ -0.39
RAB40CQ96S21 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC12.6□□□□□ -0.39
RAB40CQ96S21 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC12.6□□□□□ -0.39
RAB40CQ96S21 AC105233.2-201ENST00000523697 349 ntBASIC12.6□□□□□ -0.39
RAB40CQ96S21 AF228730.5-201ENST00000530288 346 ntBASIC12.6□□□□□ -0.39
RAB40CQ96S21 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
RAB40CQ96S21 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
RAB40CQ96S21 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
RAB40CQ96S21 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC12.6□□□□□ -0.39
RAB40CQ96S21 LITAF-211ENST00000572255 516 ntTSL 4 BASIC12.6□□□□□ -0.39
RAB40CQ96S21 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
RAB40CQ96S21 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC12.6□□□□□ -0.39
RAB40CQ96S21 KLK8-205ENST00000593490 267 ntTSL 3 BASIC12.6□□□□□ -0.39
RAB40CQ96S21 AL121894.2-201ENST00000602977 491 ntBASIC12.6□□□□□ -0.39
RAB40CQ96S21 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RAB40CQ96S21 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC12.6□□□□□ -0.39
RAB40CQ96S21 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC12.6□□□□□ -0.39
RAB40CQ96S21 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC12.6□□□□□ -0.39
RAB40CQ96S21 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC12.6□□□□□ -0.39
RAB40CQ96S21 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
RAB40CQ96S21 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC12.6□□□□□ -0.39
RAB40CQ96S21 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
RAB40CQ96S21 AC113367.3-201ENST00000508316 1912 ntBASIC12.6□□□□□ -0.39
RAB40CQ96S21 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RAB40CQ96S21 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
RAB40CQ96S21 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
RAB40CQ96S21 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
RAB40CQ96S21 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
RAB40CQ96S21 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RAB40CQ96S21 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RAB40CQ96S21 AC084364.1-201ENST00000551967 1556 ntBASIC12.6□□□□□ -0.39
RAB40CQ96S21 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RAB40CQ96S21 HLA-A-201ENST00000376802 1334 ntBASIC12.6□□□□□ -0.39
RAB40CQ96S21 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
RAB40CQ96S21 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC12.6□□□□□ -0.39
RAB40CQ96S21 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC12.59□□□□□ -0.39
RAB40CQ96S21 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB40CQ96S21 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RAB40CQ96S21 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RAB40CQ96S21 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB40CQ96S21 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB40CQ96S21 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
RAB40CQ96S21 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB40CQ96S21 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB40CQ96S21 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
RAB40CQ96S21 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
RAB40CQ96S21 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC12.59□□□□□ -0.39
RAB40CQ96S21 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB40CQ96S21 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC12.59□□□□□ -0.39
RAB40CQ96S21 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC12.59□□□□□ -0.39
RAB40CQ96S21 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
RAB40CQ96S21 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB40CQ96S21 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC12.59□□□□□ -0.39
RAB40CQ96S21 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB40CQ96S21 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC12.59□□□□□ -0.39
RAB40CQ96S21 AL139010.1-201ENST00000454878 894 ntBASIC12.59□□□□□ -0.39
RAB40CQ96S21 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC12.59□□□□□ -0.39
RAB40CQ96S21 RNA5SP419-201ENST00000515908 135 ntBASIC12.59□□□□□ -0.39
RAB40CQ96S21 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC12.59□□□□□ -0.39
RAB40CQ96S21 HNRNPUP1-201ENST00000554987 333 ntBASIC12.59□□□□□ -0.39
RAB40CQ96S21 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC12.59□□□□□ -0.39
RAB40CQ96S21 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC12.59□□□□□ -0.39
RAB40CQ96S21 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
RAB40CQ96S21 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC12.59□□□□□ -0.39
RAB40CQ96S21 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC12.59□□□□□ -0.39
RAB40CQ96S21 AC097359.3-201ENST00000603982 1210 ntBASIC12.59□□□□□ -0.39
RAB40CQ96S21 MIR7706-201ENST00000613747 67 ntBASIC12.59□□□□□ -0.39
RAB40CQ96S21 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RAB40CQ96S21 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
RAB40CQ96S21 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB40CQ96S21 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB40CQ96S21 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC12.59□□□□□ -0.39
RAB40CQ96S21 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC12.59□□□□□ -0.39
RAB40CQ96S21 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RAB40CQ96S21 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB40CQ96S21 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC12.59□□□□□ -0.39
RAB40CQ96S21 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RAB40CQ96S21 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC12.59□□□□□ -0.39
RAB40CQ96S21 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
RAB40CQ96S21 AL136982.4-201ENST00000437689 1740 ntBASIC12.59□□□□□ -0.39
RAB40CQ96S21 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC12.59□□□□□ -0.39
RAB40CQ96S21 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms