Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 AL022334.2-201ENST00000610000 484 ntBASIC16.36■□□□□ 0.21
ALPK3Q96L96 MIR6769A-201ENST00000617340 73 ntBASIC16.36■□□□□ 0.21
ALPK3Q96L96 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC16.36■□□□□ 0.21
ALPK3Q96L96 AC002472.4-201ENST00000641915 272 ntBASIC16.36■□□□□ 0.21
ALPK3Q96L96 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
ALPK3Q96L96 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
ALPK3Q96L96 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
ALPK3Q96L96 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ALPK3Q96L96 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ALPK3Q96L96 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
ALPK3Q96L96 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC16.36■□□□□ 0.21
ALPK3Q96L96 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ALPK3Q96L96 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
ALPK3Q96L96 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.36■□□□□ 0.21
ALPK3Q96L96 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.35■□□□□ 0.21
ALPK3Q96L96 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
ALPK3Q96L96 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
ALPK3Q96L96 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC16.35■□□□□ 0.21
ALPK3Q96L96 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ALPK3Q96L96 BCAS2P2-201ENST00000425064 674 ntBASIC16.35■□□□□ 0.21
ALPK3Q96L96 DPY19L2P5-201ENST00000456300 331 ntBASIC16.35■□□□□ 0.21
ALPK3Q96L96 AC093909.3-201ENST00000504783 336 ntBASIC16.35■□□□□ 0.21
ALPK3Q96L96 AC084752.1-201ENST00000509766 622 ntBASIC16.35■□□□□ 0.21
ALPK3Q96L96 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC16.35■□□□□ 0.21
ALPK3Q96L96 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC16.35■□□□□ 0.21
ALPK3Q96L96 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC16.35■□□□□ 0.21
ALPK3Q96L96 PTPN20CP-201ENST00000614090 920 ntBASIC16.35■□□□□ 0.21
ALPK3Q96L96 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC16.35■□□□□ 0.21
ALPK3Q96L96 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
ALPK3Q96L96 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
ALPK3Q96L96 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ALPK3Q96L96 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
ALPK3Q96L96 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ALPK3Q96L96 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ALPK3Q96L96 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
ALPK3Q96L96 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC16.35■□□□□ 0.21
ALPK3Q96L96 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ALPK3Q96L96 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC16.35■□□□□ 0.21
ALPK3Q96L96 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ALPK3Q96L96 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ALPK3Q96L96 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ALPK3Q96L96 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ALPK3Q96L96 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ALPK3Q96L96 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
ALPK3Q96L96 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC16.35■□□□□ 0.21
ALPK3Q96L96 CCNC-217ENST00000523985 958 ntTSL 2 BASIC16.35■□□□□ 0.21
ALPK3Q96L96 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC16.35■□□□□ 0.21
ALPK3Q96L96 HMGB1P24-201ENST00000611897 328 ntBASIC16.35■□□□□ 0.21
ALPK3Q96L96 AC018695.6-201ENST00000614011 534 ntBASIC16.35■□□□□ 0.21
ALPK3Q96L96 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ALPK3Q96L96 AC011471.3-201ENST00000623576 402 ntBASIC16.35■□□□□ 0.21
ALPK3Q96L96 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.35■□□□□ 0.21
ALPK3Q96L96 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
ALPK3Q96L96 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
ALPK3Q96L96 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
ALPK3Q96L96 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
ALPK3Q96L96 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ALPK3Q96L96 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
ALPK3Q96L96 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.34■□□□□ 0.21
ALPK3Q96L96 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ALPK3Q96L96 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ALPK3Q96L96 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
ALPK3Q96L96 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.34■□□□□ 0.21
ALPK3Q96L96 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
ALPK3Q96L96 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ALPK3Q96L96 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ALPK3Q96L96 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
ALPK3Q96L96 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC16.34■□□□□ 0.21
ALPK3Q96L96 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ALPK3Q96L96 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ALPK3Q96L96 SERF2-209ENST00000409646 559 ntTSL 4 BASIC16.34■□□□□ 0.21
ALPK3Q96L96 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC16.34■□□□□ 0.21
ALPK3Q96L96 AC004522.1-201ENST00000419978 654 ntBASIC16.34■□□□□ 0.21
ALPK3Q96L96 TSPY25P-201ENST00000429463 745 ntBASIC16.34■□□□□ 0.21
ALPK3Q96L96 GCSHP3-201ENST00000431120 391 ntBASIC16.34■□□□□ 0.21
ALPK3Q96L96 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC16.34■□□□□ 0.21
ALPK3Q96L96 AP000911.2-201ENST00000534330 502 ntBASIC16.34■□□□□ 0.21
ALPK3Q96L96 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC16.34■□□□□ 0.21
ALPK3Q96L96 MIR6816-201ENST00000620368 66 ntBASIC16.34■□□□□ 0.21
ALPK3Q96L96 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ALPK3Q96L96 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC16.34■□□□□ 0.21
ALPK3Q96L96 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
ALPK3Q96L96 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
ALPK3Q96L96 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
ALPK3Q96L96 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ALPK3Q96L96 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
ALPK3Q96L96 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
ALPK3Q96L96 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
ALPK3Q96L96 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
ALPK3Q96L96 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
ALPK3Q96L96 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
ALPK3Q96L96 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ALPK3Q96L96 AL512306.1-201ENST00000432698 848 ntBASIC16.33■□□□□ 0.21
ALPK3Q96L96 OR2R1P-201ENST00000441404 914 ntBASIC16.33■□□□□ 0.21
ALPK3Q96L96 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC16.33■□□□□ 0.21
ALPK3Q96L96 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC16.33■□□□□ 0.21
ALPK3Q96L96 AC012073.1-201ENST00000606114 1108 ntBASIC16.33■□□□□ 0.21
ALPK3Q96L96 LINC01783-202ENST00000614408 828 ntBASIC16.33■□□□□ 0.21
ALPK3Q96L96 BX284668.2-205ENST00000619677 828 ntBASIC16.33■□□□□ 0.21
ALPK3Q96L96 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC16.33■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms