Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
FOXRED1Q96CU9 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
FOXRED1Q96CU9 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.53□□□□□ -0.24
FOXRED1Q96CU9 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
FOXRED1Q96CU9 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
FOXRED1Q96CU9 AC211486.1-202ENST00000416371 468 ntBASIC13.53□□□□□ -0.24
FOXRED1Q96CU9 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC13.53□□□□□ -0.24
FOXRED1Q96CU9 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC13.53□□□□□ -0.24
FOXRED1Q96CU9 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
FOXRED1Q96CU9 AC004967.1-201ENST00000453589 447 ntBASIC13.53□□□□□ -0.24
FOXRED1Q96CU9 AC211476.1-201ENST00000503899 468 ntBASIC13.53□□□□□ -0.24
FOXRED1Q96CU9 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC13.53□□□□□ -0.24
FOXRED1Q96CU9 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
FOXRED1Q96CU9 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
FOXRED1Q96CU9 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
FOXRED1Q96CU9 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
FOXRED1Q96CU9 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
FOXRED1Q96CU9 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
FOXRED1Q96CU9 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
FOXRED1Q96CU9 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
FOXRED1Q96CU9 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
FOXRED1Q96CU9 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
FOXRED1Q96CU9 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
FOXRED1Q96CU9 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
FOXRED1Q96CU9 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
FOXRED1Q96CU9 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.53□□□□□ -0.24
FOXRED1Q96CU9 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.53□□□□□ -0.24
FOXRED1Q96CU9 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.53□□□□□ -0.24
FOXRED1Q96CU9 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
FOXRED1Q96CU9 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
FOXRED1Q96CU9 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
FOXRED1Q96CU9 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
FOXRED1Q96CU9 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
FOXRED1Q96CU9 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
FOXRED1Q96CU9 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
FOXRED1Q96CU9 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
FOXRED1Q96CU9 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
FOXRED1Q96CU9 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
FOXRED1Q96CU9 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
FOXRED1Q96CU9 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
FOXRED1Q96CU9 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
FOXRED1Q96CU9 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
FOXRED1Q96CU9 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
FOXRED1Q96CU9 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
FOXRED1Q96CU9 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.52□□□□□ -0.24
FOXRED1Q96CU9 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
FOXRED1Q96CU9 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
FOXRED1Q96CU9 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
FOXRED1Q96CU9 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
FOXRED1Q96CU9 TFAMP1-201ENST00000412727 736 ntBASIC13.52□□□□□ -0.25
FOXRED1Q96CU9 AL671277.1-201ENST00000429656 993 ntBASIC13.52□□□□□ -0.25
FOXRED1Q96CU9 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC13.52□□□□□ -0.25
FOXRED1Q96CU9 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC13.52□□□□□ -0.25
FOXRED1Q96CU9 CEND1P1-201ENST00000451006 455 ntBASIC13.52□□□□□ -0.25
FOXRED1Q96CU9 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC13.52□□□□□ -0.25
FOXRED1Q96CU9 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC13.52□□□□□ -0.25
FOXRED1Q96CU9 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC13.52□□□□□ -0.25
FOXRED1Q96CU9 AC112482.1-201ENST00000492080 688 ntBASIC13.52□□□□□ -0.25
FOXRED1Q96CU9 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
FOXRED1Q96CU9 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC13.52□□□□□ -0.25
FOXRED1Q96CU9 AL135744.1-201ENST00000565098 629 ntBASIC13.52□□□□□ -0.25
FOXRED1Q96CU9 NAA38-207ENST00000576861 556 ntTSL 3 BASIC13.52□□□□□ -0.25
FOXRED1Q96CU9 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC13.52□□□□□ -0.25
FOXRED1Q96CU9 MIR4469-201ENST00000583919 79 ntBASIC13.52□□□□□ -0.25
FOXRED1Q96CU9 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
FOXRED1Q96CU9 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.52□□□□□ -0.25
FOXRED1Q96CU9 AC006538.3-201ENST00000612495 578 ntBASIC13.52□□□□□ -0.25
FOXRED1Q96CU9 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
FOXRED1Q96CU9 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.52□□□□□ -0.25
FOXRED1Q96CU9 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
FOXRED1Q96CU9 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
FOXRED1Q96CU9 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
FOXRED1Q96CU9 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
FOXRED1Q96CU9 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
FOXRED1Q96CU9 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
FOXRED1Q96CU9 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.52□□□□□ -0.25
FOXRED1Q96CU9 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
FOXRED1Q96CU9 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
FOXRED1Q96CU9 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
FOXRED1Q96CU9 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
FOXRED1Q96CU9 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
FOXRED1Q96CU9 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.52□□□□□ -0.25
FOXRED1Q96CU9 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
FOXRED1Q96CU9 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC13.52□□□□□ -0.25
FOXRED1Q96CU9 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.52□□□□□ -0.25
FOXRED1Q96CU9 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
FOXRED1Q96CU9 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.52□□□□□ -0.25
FOXRED1Q96CU9 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
FOXRED1Q96CU9 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.52□□□□□ -0.25
FOXRED1Q96CU9 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
FOXRED1Q96CU9 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
FOXRED1Q96CU9 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
FOXRED1Q96CU9 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
FOXRED1Q96CU9 AC087386.2-201ENST00000623212 4637 ntBASIC13.52□□□□□ -0.25
FOXRED1Q96CU9 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.52□□□□□ -0.25
FOXRED1Q96CU9 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
FOXRED1Q96CU9 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
FOXRED1Q96CU9 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
FOXRED1Q96CU9 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
FOXRED1Q96CU9 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms