Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HMGB4Q8WW32 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HMGB4Q8WW32 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HMGB4Q8WW32 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.07
HMGB4Q8WW32 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
HMGB4Q8WW32 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
HMGB4Q8WW32 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HMGB4Q8WW32 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
HMGB4Q8WW32 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
HMGB4Q8WW32 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
HMGB4Q8WW32 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
HMGB4Q8WW32 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.46■□□□□ 0.06
HMGB4Q8WW32 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
HMGB4Q8WW32 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.06
HMGB4Q8WW32 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.45■□□□□ 0.06
HMGB4Q8WW32 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HMGB4Q8WW32 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
HMGB4Q8WW32 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.45■□□□□ 0.06
HMGB4Q8WW32 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HMGB4Q8WW32 AC022188.1-201ENST00000620960 1664 ntBASIC15.45■□□□□ 0.06
HMGB4Q8WW32 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HMGB4Q8WW32 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
HMGB4Q8WW32 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC15.45■□□□□ 0.06
HMGB4Q8WW32 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HMGB4Q8WW32 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HMGB4Q8WW32 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HMGB4Q8WW32 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.45■□□□□ 0.06
HMGB4Q8WW32 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HMGB4Q8WW32 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HMGB4Q8WW32 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
HMGB4Q8WW32 HNRNPA1P32-201ENST00000396326 963 ntBASIC15.45■□□□□ 0.06
HMGB4Q8WW32 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC15.45■□□□□ 0.06
HMGB4Q8WW32 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15.45■□□□□ 0.06
HMGB4Q8WW32 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC15.45■□□□□ 0.06
HMGB4Q8WW32 CNN2P10-201ENST00000443067 918 ntBASIC15.45■□□□□ 0.06
HMGB4Q8WW32 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
HMGB4Q8WW32 AC004898.1-201ENST00000451057 766 ntBASIC15.45■□□□□ 0.06
HMGB4Q8WW32 AKR7A2P1-201ENST00000460134 915 ntBASIC15.45■□□□□ 0.06
HMGB4Q8WW32 NEU3-202ENST00000526068 431 ntTSL 2 BASIC15.45■□□□□ 0.06
HMGB4Q8WW32 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HMGB4Q8WW32 ARL16-210ENST00000574938 751 ntTSL 2 BASIC15.45■□□□□ 0.06
HMGB4Q8WW32 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.45■□□□□ 0.06
HMGB4Q8WW32 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.45■□□□□ 0.06
HMGB4Q8WW32 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
HMGB4Q8WW32 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC15.45■□□□□ 0.06
HMGB4Q8WW32 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.45■□□□□ 0.06
HMGB4Q8WW32 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
HMGB4Q8WW32 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.45■□□□□ 0.06
HMGB4Q8WW32 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HMGB4Q8WW32 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
HMGB4Q8WW32 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
HMGB4Q8WW32 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
HMGB4Q8WW32 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
HMGB4Q8WW32 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HMGB4Q8WW32 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.45■□□□□ 0.06
HMGB4Q8WW32 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC15.44■□□□□ 0.06
HMGB4Q8WW32 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HMGB4Q8WW32 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.44■□□□□ 0.06
HMGB4Q8WW32 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HMGB4Q8WW32 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HMGB4Q8WW32 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
HMGB4Q8WW32 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
HMGB4Q8WW32 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HMGB4Q8WW32 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
HMGB4Q8WW32 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HMGB4Q8WW32 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HMGB4Q8WW32 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.44■□□□□ 0.06
HMGB4Q8WW32 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
HMGB4Q8WW32 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HMGB4Q8WW32 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
HMGB4Q8WW32 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
HMGB4Q8WW32 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HMGB4Q8WW32 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
HMGB4Q8WW32 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HMGB4Q8WW32 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HMGB4Q8WW32 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC15.44■□□□□ 0.06
HMGB4Q8WW32 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.44■□□□□ 0.06
HMGB4Q8WW32 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC15.44■□□□□ 0.06
HMGB4Q8WW32 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC15.44■□□□□ 0.06
HMGB4Q8WW32 FNTAP2-201ENST00000430308 634 ntBASIC15.44■□□□□ 0.06
HMGB4Q8WW32 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC15.44■□□□□ 0.06
HMGB4Q8WW32 HLA-DPB2-205ENST00000435074 1188 ntBASIC15.44■□□□□ 0.06
HMGB4Q8WW32 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HMGB4Q8WW32 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC15.44■□□□□ 0.06
HMGB4Q8WW32 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC15.44■□□□□ 0.06
HMGB4Q8WW32 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC15.44■□□□□ 0.06
HMGB4Q8WW32 RHOQP1-201ENST00000555758 579 ntBASIC15.44■□□□□ 0.06
HMGB4Q8WW32 AC020914.3-201ENST00000594712 304 ntBASIC15.44■□□□□ 0.06
HMGB4Q8WW32 ENPP7P14-201ENST00000621765 1040 ntBASIC15.44■□□□□ 0.06
HMGB4Q8WW32 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.44■□□□□ 0.06
HMGB4Q8WW32 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HMGB4Q8WW32 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
HMGB4Q8WW32 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.44■□□□□ 0.06
HMGB4Q8WW32 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
HMGB4Q8WW32 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.44■□□□□ 0.06
HMGB4Q8WW32 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
HMGB4Q8WW32 MTHFR-217ENST00000641820 1569 ntBASIC15.44■□□□□ 0.06
HMGB4Q8WW32 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.44■□□□□ 0.06
HMGB4Q8WW32 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.44■□□□□ 0.06
HMGB4Q8WW32 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms