Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NKX2-3Q8TAU0 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NKX2-3Q8TAU0 MGST3-203ENST00000367885 680 ntTSL 2 BASIC18.17■□□□□ 0.5
NKX2-3Q8TAU0 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
NKX2-3Q8TAU0 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
NKX2-3Q8TAU0 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC18.17■□□□□ 0.5
NKX2-3Q8TAU0 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC18.17■□□□□ 0.5
NKX2-3Q8TAU0 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC18.17■□□□□ 0.5
NKX2-3Q8TAU0 IFT20-206ENST00000578122 834 ntTSL 2 BASIC18.17■□□□□ 0.5
NKX2-3Q8TAU0 IFT20-208ENST00000578985 831 ntTSL 3 BASIC18.17■□□□□ 0.5
NKX2-3Q8TAU0 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
NKX2-3Q8TAU0 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC18.17■□□□□ 0.5
NKX2-3Q8TAU0 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NKX2-3Q8TAU0 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
NKX2-3Q8TAU0 REXO1L4P-201ENST00000605109 1937 ntBASIC18.17■□□□□ 0.5
NKX2-3Q8TAU0 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NKX2-3Q8TAU0 AC090340.1-201ENST00000620778 4980 ntBASIC18.17■□□□□ 0.5
NKX2-3Q8TAU0 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NKX2-3Q8TAU0 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NKX2-3Q8TAU0 MECR-202ENST00000373791 2416 ntTSL 2 BASIC18.17■□□□□ 0.5
NKX2-3Q8TAU0 GSN-215ENST00000545652 2428 ntTSL 2 BASIC18.17■□□□□ 0.5
NKX2-3Q8TAU0 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NKX2-3Q8TAU0 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC18.17■□□□□ 0.5
NKX2-3Q8TAU0 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC18.17■□□□□ 0.5
NKX2-3Q8TAU0 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NKX2-3Q8TAU0 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC18.16■□□□□ 0.5
NKX2-3Q8TAU0 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
NKX2-3Q8TAU0 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
NKX2-3Q8TAU0 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC18.16■□□□□ 0.5
NKX2-3Q8TAU0 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC18.16■□□□□ 0.5
NKX2-3Q8TAU0 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC18.16■□□□□ 0.5
NKX2-3Q8TAU0 AC011270.2-201ENST00000624293 2550 ntBASIC18.16■□□□□ 0.5
NKX2-3Q8TAU0 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
NKX2-3Q8TAU0 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
NKX2-3Q8TAU0 BANP-201ENST00000286122 2368 ntTSL 5 BASIC18.16■□□□□ 0.5
NKX2-3Q8TAU0 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NKX2-3Q8TAU0 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
NKX2-3Q8TAU0 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NKX2-3Q8TAU0 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NKX2-3Q8TAU0 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
NKX2-3Q8TAU0 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NKX2-3Q8TAU0 AL355864.2-201ENST00000447420 863 ntBASIC18.16■□□□□ 0.5
NKX2-3Q8TAU0 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC18.16■□□□□ 0.5
NKX2-3Q8TAU0 ARTN-209ENST00000479128 471 ntTSL 3 BASIC18.16■□□□□ 0.5
NKX2-3Q8TAU0 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC18.16■□□□□ 0.5
NKX2-3Q8TAU0 ENPP7P5-201ENST00000541031 1031 ntBASIC18.16■□□□□ 0.5
NKX2-3Q8TAU0 C2orf69P2-201ENST00000562032 1123 ntBASIC18.16■□□□□ 0.5
NKX2-3Q8TAU0 RN7SL560P-201ENST00000577943 264 ntBASIC18.16■□□□□ 0.5
NKX2-3Q8TAU0 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC18.16■□□□□ 0.5
NKX2-3Q8TAU0 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC18.16■□□□□ 0.5
NKX2-3Q8TAU0 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NKX2-3Q8TAU0 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NKX2-3Q8TAU0 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC18.16■□□□□ 0.5
NKX2-3Q8TAU0 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC18.16■□□□□ 0.5
NKX2-3Q8TAU0 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC18.16■□□□□ 0.5
NKX2-3Q8TAU0 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NKX2-3Q8TAU0 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
NKX2-3Q8TAU0 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC18.16■□□□□ 0.5
NKX2-3Q8TAU0 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NKX2-3Q8TAU0 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NKX2-3Q8TAU0 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NKX2-3Q8TAU0 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC18.16■□□□□ 0.5
NKX2-3Q8TAU0 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NKX2-3Q8TAU0 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NKX2-3Q8TAU0 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
NKX2-3Q8TAU0 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NKX2-3Q8TAU0 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NKX2-3Q8TAU0 REXO1L5P-201ENST00000622260 2098 ntBASIC18.15■□□□□ 0.5
NKX2-3Q8TAU0 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC18.15■□□□□ 0.5
NKX2-3Q8TAU0 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NKX2-3Q8TAU0 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NKX2-3Q8TAU0 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NKX2-3Q8TAU0 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NKX2-3Q8TAU0 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
NKX2-3Q8TAU0 RNU1-114P-201ENST00000365297 166 ntBASIC18.15■□□□□ 0.5
NKX2-3Q8TAU0 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NKX2-3Q8TAU0 HLA-K-203ENST00000430151 1046 ntBASIC18.15■□□□□ 0.5
NKX2-3Q8TAU0 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC18.15■□□□□ 0.5
NKX2-3Q8TAU0 AP001582.1-201ENST00000525856 295 ntBASIC18.15■□□□□ 0.5
NKX2-3Q8TAU0 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
NKX2-3Q8TAU0 AP001258.2-201ENST00000529891 490 ntBASIC18.15■□□□□ 0.5
NKX2-3Q8TAU0 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
NKX2-3Q8TAU0 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC18.15■□□□□ 0.5
NKX2-3Q8TAU0 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC18.15■□□□□ 0.5
NKX2-3Q8TAU0 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
NKX2-3Q8TAU0 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NKX2-3Q8TAU0 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC18.15■□□□□ 0.5
NKX2-3Q8TAU0 AL022328.3-201ENST00000607943 679 ntBASIC18.15■□□□□ 0.5
NKX2-3Q8TAU0 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
NKX2-3Q8TAU0 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NKX2-3Q8TAU0 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NKX2-3Q8TAU0 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
NKX2-3Q8TAU0 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
NKX2-3Q8TAU0 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC18.15■□□□□ 0.5
NKX2-3Q8TAU0 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC18.15■□□□□ 0.5
NKX2-3Q8TAU0 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NKX2-3Q8TAU0 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NKX2-3Q8TAU0 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NKX2-3Q8TAU0 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
NKX2-3Q8TAU0 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms