Protein–RNA interactions for Protein: Q8NB78

KDM1B, Lysine-specific histone demethylase 1B, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1BQ8NB78 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.77■□□□□ 0.11
KDM1BQ8NB78 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
KDM1BQ8NB78 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
KDM1BQ8NB78 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
KDM1BQ8NB78 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
KDM1BQ8NB78 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
KDM1BQ8NB78 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.77■□□□□ 0.11
KDM1BQ8NB78 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
KDM1BQ8NB78 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.77■□□□□ 0.11
KDM1BQ8NB78 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
KDM1BQ8NB78 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.77■□□□□ 0.11
KDM1BQ8NB78 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
KDM1BQ8NB78 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
KDM1BQ8NB78 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.77■□□□□ 0.11
KDM1BQ8NB78 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
KDM1BQ8NB78 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
KDM1BQ8NB78 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
KDM1BQ8NB78 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.76■□□□□ 0.11
KDM1BQ8NB78 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
KDM1BQ8NB78 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
KDM1BQ8NB78 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.76■□□□□ 0.11
KDM1BQ8NB78 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC15.76■□□□□ 0.11
KDM1BQ8NB78 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
KDM1BQ8NB78 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
KDM1BQ8NB78 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
KDM1BQ8NB78 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.76■□□□□ 0.11
KDM1BQ8NB78 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
KDM1BQ8NB78 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
KDM1BQ8NB78 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
KDM1BQ8NB78 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
KDM1BQ8NB78 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
KDM1BQ8NB78 AC105250.1-201ENST00000509378 2057 ntBASIC15.76■□□□□ 0.11
KDM1BQ8NB78 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC15.76■□□□□ 0.11
KDM1BQ8NB78 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
KDM1BQ8NB78 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
KDM1BQ8NB78 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
KDM1BQ8NB78 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
KDM1BQ8NB78 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
KDM1BQ8NB78 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
KDM1BQ8NB78 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.76■□□□□ 0.11
KDM1BQ8NB78 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.76■□□□□ 0.11
KDM1BQ8NB78 AL355864.2-201ENST00000447420 863 ntBASIC15.76■□□□□ 0.11
KDM1BQ8NB78 AC093433.1-201ENST00000458048 571 ntBASIC15.76■□□□□ 0.11
KDM1BQ8NB78 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.76■□□□□ 0.11
KDM1BQ8NB78 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC15.76■□□□□ 0.11
KDM1BQ8NB78 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
KDM1BQ8NB78 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
KDM1BQ8NB78 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC15.76■□□□□ 0.11
KDM1BQ8NB78 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
KDM1BQ8NB78 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
KDM1BQ8NB78 AL645728.2-202ENST00000641679 227 ntBASIC15.76■□□□□ 0.11
KDM1BQ8NB78 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
KDM1BQ8NB78 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
KDM1BQ8NB78 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.76■□□□□ 0.11
KDM1BQ8NB78 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.76■□□□□ 0.11
KDM1BQ8NB78 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
KDM1BQ8NB78 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
KDM1BQ8NB78 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
KDM1BQ8NB78 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
KDM1BQ8NB78 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
KDM1BQ8NB78 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
KDM1BQ8NB78 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
KDM1BQ8NB78 AP002414.2-201ENST00000591780 3365 ntBASIC15.76■□□□□ 0.11
KDM1BQ8NB78 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
KDM1BQ8NB78 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
KDM1BQ8NB78 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
KDM1BQ8NB78 AC087481.3-201ENST00000602886 1894 ntBASIC15.76■□□□□ 0.11
KDM1BQ8NB78 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.76■□□□□ 0.11
KDM1BQ8NB78 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.75■□□□□ 0.11
KDM1BQ8NB78 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
KDM1BQ8NB78 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
KDM1BQ8NB78 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
KDM1BQ8NB78 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
KDM1BQ8NB78 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
KDM1BQ8NB78 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
KDM1BQ8NB78 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
KDM1BQ8NB78 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
KDM1BQ8NB78 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
KDM1BQ8NB78 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
KDM1BQ8NB78 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
KDM1BQ8NB78 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
KDM1BQ8NB78 AC090616.6-203ENST00000579186 1945 ntBASIC15.75■□□□□ 0.11
KDM1BQ8NB78 MIR658-201ENST00000385210 100 ntBASIC15.75■□□□□ 0.11
KDM1BQ8NB78 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
KDM1BQ8NB78 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.75■□□□□ 0.11
KDM1BQ8NB78 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
KDM1BQ8NB78 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.75■□□□□ 0.11
KDM1BQ8NB78 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC15.75■□□□□ 0.11
KDM1BQ8NB78 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.75■□□□□ 0.11
KDM1BQ8NB78 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
KDM1BQ8NB78 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.75■□□□□ 0.11
KDM1BQ8NB78 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC15.75■□□□□ 0.11
KDM1BQ8NB78 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
KDM1BQ8NB78 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
KDM1BQ8NB78 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.75■□□□□ 0.11
KDM1BQ8NB78 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.75■□□□□ 0.11
KDM1BQ8NB78 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.75■□□□□ 0.11
KDM1BQ8NB78 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
KDM1BQ8NB78 AP005019.2-201ENST00000615104 511 ntBASIC15.75■□□□□ 0.11
KDM1BQ8NB78 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms