Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.27■□□□□ 0.2
CCDC33Q8N5R6 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC33Q8N5R6 AC091951.1-201ENST00000512854 2465 ntBASIC16.27■□□□□ 0.2
CCDC33Q8N5R6 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.27■□□□□ 0.2
CCDC33Q8N5R6 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC16.27■□□□□ 0.2
CCDC33Q8N5R6 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.27■□□□□ 0.2
CCDC33Q8N5R6 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
CCDC33Q8N5R6 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
CCDC33Q8N5R6 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16.27■□□□□ 0.2
CCDC33Q8N5R6 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.27■□□□□ 0.2
CCDC33Q8N5R6 FO393414.2-201ENST00000405153 598 ntBASIC16.27■□□□□ 0.2
CCDC33Q8N5R6 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CCDC33Q8N5R6 AC022210.1-201ENST00000449856 793 ntBASIC16.27■□□□□ 0.2
CCDC33Q8N5R6 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC16.27■□□□□ 0.2
CCDC33Q8N5R6 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.27■□□□□ 0.2
CCDC33Q8N5R6 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.27■□□□□ 0.2
CCDC33Q8N5R6 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.27■□□□□ 0.2
CCDC33Q8N5R6 AC106886.1-201ENST00000568660 600 ntBASIC16.27■□□□□ 0.2
CCDC33Q8N5R6 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC33Q8N5R6 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CCDC33Q8N5R6 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC16.27■□□□□ 0.2
CCDC33Q8N5R6 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC16.27■□□□□ 0.2
CCDC33Q8N5R6 AL512343.1-201ENST00000605837 169 ntBASIC16.27■□□□□ 0.2
CCDC33Q8N5R6 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC33Q8N5R6 MIR6799-201ENST00000620297 69 ntBASIC16.27■□□□□ 0.2
CCDC33Q8N5R6 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC33Q8N5R6 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC33Q8N5R6 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.27■□□□□ 0.2
CCDC33Q8N5R6 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CCDC33Q8N5R6 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC33Q8N5R6 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC33Q8N5R6 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC33Q8N5R6 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC33Q8N5R6 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC33Q8N5R6 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
CCDC33Q8N5R6 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC33Q8N5R6 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
CCDC33Q8N5R6 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC33Q8N5R6 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.27■□□□□ 0.19
CCDC33Q8N5R6 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC33Q8N5R6 AC138035.3-201ENST00000622706 2791 ntBASIC16.26■□□□□ 0.19
CCDC33Q8N5R6 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
CCDC33Q8N5R6 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC33Q8N5R6 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC33Q8N5R6 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.26■□□□□ 0.19
CCDC33Q8N5R6 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
CCDC33Q8N5R6 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC33Q8N5R6 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CCDC33Q8N5R6 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC33Q8N5R6 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC33Q8N5R6 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC33Q8N5R6 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC33Q8N5R6 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC33Q8N5R6 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC33Q8N5R6 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.26■□□□□ 0.19
CCDC33Q8N5R6 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
CCDC33Q8N5R6 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CCDC33Q8N5R6 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CCDC33Q8N5R6 KRT18P64-201ENST00000434946 1219 ntBASIC16.26■□□□□ 0.19
CCDC33Q8N5R6 TARDBPP1-201ENST00000442013 1203 ntBASIC16.26■□□□□ 0.19
CCDC33Q8N5R6 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC16.26■□□□□ 0.19
CCDC33Q8N5R6 AC104596.2-201ENST00000512793 793 ntBASIC16.26■□□□□ 0.19
CCDC33Q8N5R6 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC16.26■□□□□ 0.19
CCDC33Q8N5R6 FUZ-207ENST00000526575 482 ntTSL 4 BASIC16.26■□□□□ 0.19
CCDC33Q8N5R6 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16.26■□□□□ 0.19
CCDC33Q8N5R6 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC16.26■□□□□ 0.19
CCDC33Q8N5R6 Six3os1_5.1-201ENST00000611000 271 ntBASIC16.26■□□□□ 0.19
CCDC33Q8N5R6 AL033527.5-201ENST00000641382 801 ntBASIC16.26■□□□□ 0.19
CCDC33Q8N5R6 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.26■□□□□ 0.19
CCDC33Q8N5R6 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC16.26■□□□□ 0.19
CCDC33Q8N5R6 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC33Q8N5R6 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CCDC33Q8N5R6 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC33Q8N5R6 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.26■□□□□ 0.19
CCDC33Q8N5R6 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC33Q8N5R6 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC33Q8N5R6 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC33Q8N5R6 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC33Q8N5R6 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.26■□□□□ 0.19
CCDC33Q8N5R6 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC33Q8N5R6 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC33Q8N5R6 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CCDC33Q8N5R6 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC33Q8N5R6 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.26■□□□□ 0.19
CCDC33Q8N5R6 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC33Q8N5R6 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.25■□□□□ 0.19
CCDC33Q8N5R6 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.25■□□□□ 0.19
CCDC33Q8N5R6 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CCDC33Q8N5R6 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC33Q8N5R6 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
CCDC33Q8N5R6 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC33Q8N5R6 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC33Q8N5R6 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
CCDC33Q8N5R6 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC33Q8N5R6 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC33Q8N5R6 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.25■□□□□ 0.19
CCDC33Q8N5R6 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.25■□□□□ 0.19
CCDC33Q8N5R6 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC33Q8N5R6 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC33Q8N5R6 AC074338.1-201ENST00000416825 156 ntBASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms