Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SCUBE3Q8IX30 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
SCUBE3Q8IX30 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SCUBE3Q8IX30 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.27■□□□□ 0.19
SCUBE3Q8IX30 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.27■□□□□ 0.19
SCUBE3Q8IX30 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.27■□□□□ 0.19
SCUBE3Q8IX30 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SCUBE3Q8IX30 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
SCUBE3Q8IX30 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SCUBE3Q8IX30 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SCUBE3Q8IX30 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SCUBE3Q8IX30 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.26■□□□□ 0.19
SCUBE3Q8IX30 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SCUBE3Q8IX30 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SCUBE3Q8IX30 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SCUBE3Q8IX30 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SCUBE3Q8IX30 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SCUBE3Q8IX30 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SCUBE3Q8IX30 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SCUBE3Q8IX30 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
SCUBE3Q8IX30 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SCUBE3Q8IX30 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
SCUBE3Q8IX30 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SCUBE3Q8IX30 ATP6V1G1-201ENST00000374050 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SCUBE3Q8IX30 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SCUBE3Q8IX30 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SCUBE3Q8IX30 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.26■□□□□ 0.19
SCUBE3Q8IX30 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SCUBE3Q8IX30 AC134915.1-201ENST00000426461 574 ntBASIC16.26■□□□□ 0.19
SCUBE3Q8IX30 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC16.26■□□□□ 0.19
SCUBE3Q8IX30 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SCUBE3Q8IX30 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC16.26■□□□□ 0.19
SCUBE3Q8IX30 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.26■□□□□ 0.19
SCUBE3Q8IX30 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
SCUBE3Q8IX30 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
SCUBE3Q8IX30 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SCUBE3Q8IX30 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.26■□□□□ 0.19
SCUBE3Q8IX30 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SCUBE3Q8IX30 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SCUBE3Q8IX30 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SCUBE3Q8IX30 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SCUBE3Q8IX30 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
SCUBE3Q8IX30 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SCUBE3Q8IX30 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SCUBE3Q8IX30 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
SCUBE3Q8IX30 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SCUBE3Q8IX30 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SCUBE3Q8IX30 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SCUBE3Q8IX30 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SCUBE3Q8IX30 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SCUBE3Q8IX30 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SCUBE3Q8IX30 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SCUBE3Q8IX30 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SCUBE3Q8IX30 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
SCUBE3Q8IX30 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
SCUBE3Q8IX30 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SCUBE3Q8IX30 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SCUBE3Q8IX30 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SCUBE3Q8IX30 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SCUBE3Q8IX30 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SCUBE3Q8IX30 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SCUBE3Q8IX30 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SCUBE3Q8IX30 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SCUBE3Q8IX30 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SCUBE3Q8IX30 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SCUBE3Q8IX30 AL442647.2-201ENST00000429864 857 ntBASIC16.25■□□□□ 0.19
SCUBE3Q8IX30 RPL13AP25-201ENST00000484130 612 ntBASIC16.25■□□□□ 0.19
SCUBE3Q8IX30 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
SCUBE3Q8IX30 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.25■□□□□ 0.19
SCUBE3Q8IX30 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC16.25■□□□□ 0.19
SCUBE3Q8IX30 AL359711.2-201ENST00000563105 872 ntBASIC16.25■□□□□ 0.19
SCUBE3Q8IX30 AL596325.1-201ENST00000563991 1082 ntBASIC16.25■□□□□ 0.19
SCUBE3Q8IX30 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC16.25■□□□□ 0.19
SCUBE3Q8IX30 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC16.25■□□□□ 0.19
SCUBE3Q8IX30 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.25■□□□□ 0.19
SCUBE3Q8IX30 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.25■□□□□ 0.19
SCUBE3Q8IX30 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SCUBE3Q8IX30 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SCUBE3Q8IX30 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SCUBE3Q8IX30 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SCUBE3Q8IX30 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SCUBE3Q8IX30 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SCUBE3Q8IX30 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SCUBE3Q8IX30 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SCUBE3Q8IX30 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SCUBE3Q8IX30 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SCUBE3Q8IX30 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SCUBE3Q8IX30 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SCUBE3Q8IX30 INTS4P2-202ENST00000614726 2019 ntBASIC16.24■□□□□ 0.19
SCUBE3Q8IX30 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SCUBE3Q8IX30 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.24■□□□□ 0.19
SCUBE3Q8IX30 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SCUBE3Q8IX30 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SCUBE3Q8IX30 AL359258.3-201ENST00000622910 2331 ntBASIC16.24■□□□□ 0.19
SCUBE3Q8IX30 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.24■□□□□ 0.19
SCUBE3Q8IX30 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SCUBE3Q8IX30 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SCUBE3Q8IX30 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SCUBE3Q8IX30 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
SCUBE3Q8IX30 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms