Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHMP1BQ7LBR1 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHMP1BQ7LBR1 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.38□□□□□ -0.11
CHMP1BQ7LBR1 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHMP1BQ7LBR1 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHMP1BQ7LBR1 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHMP1BQ7LBR1 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CHMP1BQ7LBR1 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHMP1BQ7LBR1 BTBD7P1-201ENST00000447253 1453 ntBASIC14.38□□□□□ -0.11
CHMP1BQ7LBR1 AP001282.1-201ENST00000531301 1499 ntBASIC14.38□□□□□ -0.11
CHMP1BQ7LBR1 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHMP1BQ7LBR1 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHMP1BQ7LBR1 AL136982.4-201ENST00000437689 1740 ntBASIC14.38□□□□□ -0.11
CHMP1BQ7LBR1 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.38□□□□□ -0.11
CHMP1BQ7LBR1 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CHMP1BQ7LBR1 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CHMP1BQ7LBR1 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CHMP1BQ7LBR1 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
CHMP1BQ7LBR1 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHMP1BQ7LBR1 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHMP1BQ7LBR1 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.38□□□□□ -0.11
CHMP1BQ7LBR1 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHMP1BQ7LBR1 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHMP1BQ7LBR1 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.38□□□□□ -0.11
CHMP1BQ7LBR1 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CHMP1BQ7LBR1 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHMP1BQ7LBR1 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CHMP1BQ7LBR1 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CHMP1BQ7LBR1 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CHMP1BQ7LBR1 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.38□□□□□ -0.11
CHMP1BQ7LBR1 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.38□□□□□ -0.11
CHMP1BQ7LBR1 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.38□□□□□ -0.11
CHMP1BQ7LBR1 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.38□□□□□ -0.11
CHMP1BQ7LBR1 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.38□□□□□ -0.11
CHMP1BQ7LBR1 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.38□□□□□ -0.11
CHMP1BQ7LBR1 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.38□□□□□ -0.11
CHMP1BQ7LBR1 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHMP1BQ7LBR1 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.38□□□□□ -0.11
CHMP1BQ7LBR1 AC135586.1-201ENST00000539323 574 ntBASIC14.38□□□□□ -0.11
CHMP1BQ7LBR1 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHMP1BQ7LBR1 RN7SL204P-201ENST00000582831 262 ntBASIC14.38□□□□□ -0.11
CHMP1BQ7LBR1 AC027307.3-201ENST00000594262 1100 ntBASIC14.38□□□□□ -0.11
CHMP1BQ7LBR1 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.38□□□□□ -0.11
CHMP1BQ7LBR1 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CHMP1BQ7LBR1 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHMP1BQ7LBR1 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
CHMP1BQ7LBR1 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHMP1BQ7LBR1 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CHMP1BQ7LBR1 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
CHMP1BQ7LBR1 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.38□□□□□ -0.11
CHMP1BQ7LBR1 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CHMP1BQ7LBR1 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CHMP1BQ7LBR1 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.38□□□□□ -0.11
CHMP1BQ7LBR1 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHMP1BQ7LBR1 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHMP1BQ7LBR1 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
CHMP1BQ7LBR1 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHMP1BQ7LBR1 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CHMP1BQ7LBR1 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
CHMP1BQ7LBR1 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.38□□□□□ -0.11
CHMP1BQ7LBR1 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.38□□□□□ -0.11
CHMP1BQ7LBR1 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.37□□□□□ -0.11
CHMP1BQ7LBR1 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHMP1BQ7LBR1 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CHMP1BQ7LBR1 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CHMP1BQ7LBR1 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHMP1BQ7LBR1 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHMP1BQ7LBR1 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.37□□□□□ -0.11
CHMP1BQ7LBR1 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.37□□□□□ -0.11
CHMP1BQ7LBR1 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
CHMP1BQ7LBR1 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CHMP1BQ7LBR1 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.37□□□□□ -0.11
CHMP1BQ7LBR1 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CHMP1BQ7LBR1 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHMP1BQ7LBR1 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC14.37□□□□□ -0.11
CHMP1BQ7LBR1 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CHMP1BQ7LBR1 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHMP1BQ7LBR1 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CHMP1BQ7LBR1 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CHMP1BQ7LBR1 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.37□□□□□ -0.11
CHMP1BQ7LBR1 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CHMP1BQ7LBR1 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.37□□□□□ -0.11
CHMP1BQ7LBR1 MIR648-201ENST00000385046 94 ntBASIC14.37□□□□□ -0.11
CHMP1BQ7LBR1 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CHMP1BQ7LBR1 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.37□□□□□ -0.11
CHMP1BQ7LBR1 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.37□□□□□ -0.11
CHMP1BQ7LBR1 UGT1A2P-201ENST00000454886 866 ntBASIC14.37□□□□□ -0.11
CHMP1BQ7LBR1 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHMP1BQ7LBR1 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHMP1BQ7LBR1 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.37□□□□□ -0.11
CHMP1BQ7LBR1 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.37□□□□□ -0.11
CHMP1BQ7LBR1 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHMP1BQ7LBR1 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.37□□□□□ -0.11
CHMP1BQ7LBR1 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.37□□□□□ -0.11
CHMP1BQ7LBR1 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
CHMP1BQ7LBR1 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.37□□□□□ -0.11
CHMP1BQ7LBR1 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CHMP1BQ7LBR1 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CHMP1BQ7LBR1 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CHMP1BQ7LBR1 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms