Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TTC39BQ5VTQ0 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.14■□□□□ 0.17
TTC39BQ5VTQ0 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TTC39BQ5VTQ0 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TTC39BQ5VTQ0 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TTC39BQ5VTQ0 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.14■□□□□ 0.17
TTC39BQ5VTQ0 AC092127.1-201ENST00000567093 3455 ntBASIC16.14■□□□□ 0.17
TTC39BQ5VTQ0 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TTC39BQ5VTQ0 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TTC39BQ5VTQ0 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TTC39BQ5VTQ0 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TTC39BQ5VTQ0 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.14■□□□□ 0.17
TTC39BQ5VTQ0 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.13■□□□□ 0.17
TTC39BQ5VTQ0 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TTC39BQ5VTQ0 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TTC39BQ5VTQ0 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.13■□□□□ 0.17
TTC39BQ5VTQ0 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TTC39BQ5VTQ0 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TTC39BQ5VTQ0 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
TTC39BQ5VTQ0 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.13■□□□□ 0.17
TTC39BQ5VTQ0 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
TTC39BQ5VTQ0 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.13■□□□□ 0.17
TTC39BQ5VTQ0 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TTC39BQ5VTQ0 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TTC39BQ5VTQ0 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.13■□□□□ 0.17
TTC39BQ5VTQ0 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
TTC39BQ5VTQ0 RN7SL692P-201ENST00000464677 288 ntBASIC16.13■□□□□ 0.17
TTC39BQ5VTQ0 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.13■□□□□ 0.17
TTC39BQ5VTQ0 AC005225.4-201ENST00000557330 545 ntBASIC16.13■□□□□ 0.17
TTC39BQ5VTQ0 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.13■□□□□ 0.17
TTC39BQ5VTQ0 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.13■□□□□ 0.17
TTC39BQ5VTQ0 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16.13■□□□□ 0.17
TTC39BQ5VTQ0 AC079416.2-201ENST00000625035 1193 ntBASIC16.13■□□□□ 0.17
TTC39BQ5VTQ0 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.13■□□□□ 0.17
TTC39BQ5VTQ0 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TTC39BQ5VTQ0 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
TTC39BQ5VTQ0 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
TTC39BQ5VTQ0 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.13■□□□□ 0.17
TTC39BQ5VTQ0 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
TTC39BQ5VTQ0 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.13■□□□□ 0.17
TTC39BQ5VTQ0 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.13■□□□□ 0.17
TTC39BQ5VTQ0 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TTC39BQ5VTQ0 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TTC39BQ5VTQ0 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TTC39BQ5VTQ0 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TTC39BQ5VTQ0 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
TTC39BQ5VTQ0 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
TTC39BQ5VTQ0 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
TTC39BQ5VTQ0 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.13■□□□□ 0.17
TTC39BQ5VTQ0 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TTC39BQ5VTQ0 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TTC39BQ5VTQ0 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TTC39BQ5VTQ0 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.12■□□□□ 0.17
TTC39BQ5VTQ0 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.12■□□□□ 0.17
TTC39BQ5VTQ0 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TTC39BQ5VTQ0 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TTC39BQ5VTQ0 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TTC39BQ5VTQ0 AL136379.1-201ENST00000623471 2642 ntBASIC16.12■□□□□ 0.17
TTC39BQ5VTQ0 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
TTC39BQ5VTQ0 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TTC39BQ5VTQ0 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TTC39BQ5VTQ0 AL442647.2-201ENST00000429864 857 ntBASIC16.12■□□□□ 0.17
TTC39BQ5VTQ0 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TTC39BQ5VTQ0 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TTC39BQ5VTQ0 FAM86LP-201ENST00000478302 853 ntBASIC16.12■□□□□ 0.17
TTC39BQ5VTQ0 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC16.12■□□□□ 0.17
TTC39BQ5VTQ0 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TTC39BQ5VTQ0 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.12■□□□□ 0.17
TTC39BQ5VTQ0 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.12■□□□□ 0.17
TTC39BQ5VTQ0 AC012645.4-201ENST00000610691 1061 ntBASIC16.12■□□□□ 0.17
TTC39BQ5VTQ0 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.12■□□□□ 0.17
TTC39BQ5VTQ0 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TTC39BQ5VTQ0 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TTC39BQ5VTQ0 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
TTC39BQ5VTQ0 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.12■□□□□ 0.17
TTC39BQ5VTQ0 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.12■□□□□ 0.17
TTC39BQ5VTQ0 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TTC39BQ5VTQ0 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TTC39BQ5VTQ0 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
TTC39BQ5VTQ0 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
TTC39BQ5VTQ0 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TTC39BQ5VTQ0 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.12■□□□□ 0.17
TTC39BQ5VTQ0 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.12■□□□□ 0.17
TTC39BQ5VTQ0 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
TTC39BQ5VTQ0 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
TTC39BQ5VTQ0 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TTC39BQ5VTQ0 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TTC39BQ5VTQ0 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
TTC39BQ5VTQ0 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TTC39BQ5VTQ0 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
TTC39BQ5VTQ0 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TTC39BQ5VTQ0 AC112693.3-201ENST00000624819 1983 ntBASIC16.11■□□□□ 0.17
TTC39BQ5VTQ0 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TTC39BQ5VTQ0 CLK3P2-201ENST00000427566 1453 ntBASIC16.11■□□□□ 0.17
TTC39BQ5VTQ0 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
TTC39BQ5VTQ0 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TTC39BQ5VTQ0 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.11■□□□□ 0.17
TTC39BQ5VTQ0 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.11■□□□□ 0.17
TTC39BQ5VTQ0 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.11■□□□□ 0.17
TTC39BQ5VTQ0 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms