Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
SSRP1Q08945 FAM207CP-201ENST00000443486 507 ntBASIC17.93■□□□□ 0.46
SSRP1Q08945 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC17.93■□□□□ 0.46
SSRP1Q08945 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SSRP1Q08945 AC055876.2-201ENST00000531834 546 ntBASIC17.93■□□□□ 0.46
SSRP1Q08945 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC17.93■□□□□ 0.46
SSRP1Q08945 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC17.93■□□□□ 0.46
SSRP1Q08945 RRP7BP-205ENST00000566851 833 ntBASIC17.93■□□□□ 0.46
SSRP1Q08945 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC17.93■□□□□ 0.46
SSRP1Q08945 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC17.93■□□□□ 0.46
SSRP1Q08945 AC004233.3-201ENST00000607794 1269 ntBASIC17.93■□□□□ 0.46
SSRP1Q08945 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC17.93■□□□□ 0.46
SSRP1Q08945 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC17.93■□□□□ 0.46
SSRP1Q08945 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SSRP1Q08945 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SSRP1Q08945 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SSRP1Q08945 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
SSRP1Q08945 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SSRP1Q08945 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SSRP1Q08945 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SSRP1Q08945 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
SSRP1Q08945 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SSRP1Q08945 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SSRP1Q08945 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
SSRP1Q08945 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SSRP1Q08945 AL596257.1-201ENST00000641463 2694 ntBASIC17.93■□□□□ 0.46
SSRP1Q08945 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC17.93■□□□□ 0.46
SSRP1Q08945 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
SSRP1Q08945 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
SSRP1Q08945 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SSRP1Q08945 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC17.92■□□□□ 0.46
SSRP1Q08945 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SSRP1Q08945 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
SSRP1Q08945 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC17.92■□□□□ 0.46
SSRP1Q08945 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
SSRP1Q08945 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SSRP1Q08945 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC17.92■□□□□ 0.46
SSRP1Q08945 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
SSRP1Q08945 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SSRP1Q08945 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC17.92■□□□□ 0.46
SSRP1Q08945 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SSRP1Q08945 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SSRP1Q08945 SUN1-204ENST00000403868 978 ntTSL 2 BASIC17.92■□□□□ 0.46
SSRP1Q08945 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC17.92■□□□□ 0.46
SSRP1Q08945 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC17.92■□□□□ 0.46
SSRP1Q08945 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC17.92■□□□□ 0.46
SSRP1Q08945 FADS2-205ENST00000517839 469 ntTSL 3 BASIC17.92■□□□□ 0.46
SSRP1Q08945 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC17.92■□□□□ 0.46
SSRP1Q08945 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC17.92■□□□□ 0.46
SSRP1Q08945 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC17.92■□□□□ 0.46
SSRP1Q08945 RN7SL204P-201ENST00000582831 262 ntBASIC17.92■□□□□ 0.46
SSRP1Q08945 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC17.92■□□□□ 0.46
SSRP1Q08945 AL049840.4-201ENST00000602422 811 ntBASIC17.92■□□□□ 0.46
SSRP1Q08945 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SSRP1Q08945 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC17.92■□□□□ 0.46
SSRP1Q08945 AC007541.1-201ENST00000570282 1469 ntBASIC17.92■□□□□ 0.46
SSRP1Q08945 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC17.92■□□□□ 0.46
SSRP1Q08945 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SSRP1Q08945 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SSRP1Q08945 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SSRP1Q08945 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC17.92■□□□□ 0.46
SSRP1Q08945 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
SSRP1Q08945 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SSRP1Q08945 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SSRP1Q08945 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SSRP1Q08945 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SSRP1Q08945 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SSRP1Q08945 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SSRP1Q08945 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC17.91■□□□□ 0.46
SSRP1Q08945 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SSRP1Q08945 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SSRP1Q08945 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SSRP1Q08945 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC17.91■□□□□ 0.46
SSRP1Q08945 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC17.91■□□□□ 0.46
SSRP1Q08945 DRD5P1-201ENST00000456605 1438 ntBASIC17.91■□□□□ 0.46
SSRP1Q08945 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SSRP1Q08945 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
SSRP1Q08945 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SSRP1Q08945 ZBTB45P1-201ENST00000452761 1456 ntBASIC17.91■□□□□ 0.46
SSRP1Q08945 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SSRP1Q08945 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SSRP1Q08945 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SSRP1Q08945 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SSRP1Q08945 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SSRP1Q08945 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SSRP1Q08945 DFFBP1-201ENST00000433250 979 ntBASIC17.91■□□□□ 0.46
SSRP1Q08945 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SSRP1Q08945 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SSRP1Q08945 GAPDHP40-201ENST00000505218 1006 ntBASIC17.91■□□□□ 0.46
SSRP1Q08945 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC17.91■□□□□ 0.46
SSRP1Q08945 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC17.91■□□□□ 0.46
SSRP1Q08945 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC17.91■□□□□ 0.46
SSRP1Q08945 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SSRP1Q08945 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC17.91■□□□□ 0.46
SSRP1Q08945 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
SSRP1Q08945 AL132655.2-201ENST00000596276 594 ntBASIC17.91■□□□□ 0.46
SSRP1Q08945 AC099568.2-201ENST00000609194 695 ntBASIC17.91■□□□□ 0.46
SSRP1Q08945 AL662799.1-202ENST00000614205 422 ntBASIC17.91■□□□□ 0.46
SSRP1Q08945 MIR8072-201ENST00000614241 80 ntBASIC17.91■□□□□ 0.46
SSRP1Q08945 AC008761.3-201ENST00000624803 892 ntBASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms