Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC13.83□□□□□ -0.2
H3F3AP84243 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.83□□□□□ -0.2
H3F3AP84243 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.83□□□□□ -0.2
H3F3AP84243 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
H3F3AP84243 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
H3F3AP84243 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
H3F3AP84243 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
H3F3AP84243 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
H3F3AP84243 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC13.83□□□□□ -0.2
H3F3AP84243 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC13.83□□□□□ -0.2
H3F3AP84243 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.83□□□□□ -0.2
H3F3AP84243 MYCLP2-201ENST00000449268 967 ntBASIC13.83□□□□□ -0.2
H3F3AP84243 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.83□□□□□ -0.2
H3F3AP84243 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC13.83□□□□□ -0.2
H3F3AP84243 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.83□□□□□ -0.2
H3F3AP84243 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC13.83□□□□□ -0.2
H3F3AP84243 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC13.83□□□□□ -0.2
H3F3AP84243 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
H3F3AP84243 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC13.83□□□□□ -0.2
H3F3AP84243 AC140912.1-201ENST00000577171 1054 ntBASIC13.83□□□□□ -0.2
H3F3AP84243 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.83□□□□□ -0.2
H3F3AP84243 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
H3F3AP84243 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC13.83□□□□□ -0.2
H3F3AP84243 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
H3F3AP84243 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
H3F3AP84243 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
H3F3AP84243 CICP11-201ENST00000434745 2827 ntBASIC13.83□□□□□ -0.2
H3F3AP84243 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
H3F3AP84243 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
H3F3AP84243 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
H3F3AP84243 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
H3F3AP84243 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
H3F3AP84243 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.83□□□□□ -0.2
H3F3AP84243 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
H3F3AP84243 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC13.83□□□□□ -0.2
H3F3AP84243 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
H3F3AP84243 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
H3F3AP84243 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
H3F3AP84243 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
H3F3AP84243 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
H3F3AP84243 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.82□□□□□ -0.2
H3F3AP84243 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
H3F3AP84243 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.82□□□□□ -0.2
H3F3AP84243 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13.82□□□□□ -0.2
H3F3AP84243 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
H3F3AP84243 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
H3F3AP84243 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
H3F3AP84243 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
H3F3AP84243 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
H3F3AP84243 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
H3F3AP84243 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
H3F3AP84243 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
H3F3AP84243 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
H3F3AP84243 ELK1P1-201ENST00000485699 580 ntBASIC13.82□□□□□ -0.2
H3F3AP84243 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC13.82□□□□□ -0.2
H3F3AP84243 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.82□□□□□ -0.2
H3F3AP84243 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC13.82□□□□□ -0.2
H3F3AP84243 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
H3F3AP84243 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.82□□□□□ -0.2
H3F3AP84243 COX11-202ENST00000571584 1108 ntTSL 2 BASIC13.82□□□□□ -0.2
H3F3AP84243 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.82□□□□□ -0.2
H3F3AP84243 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
H3F3AP84243 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.82□□□□□ -0.2
H3F3AP84243 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC13.82□□□□□ -0.2
H3F3AP84243 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.82□□□□□ -0.2
H3F3AP84243 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
H3F3AP84243 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
H3F3AP84243 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
H3F3AP84243 MROH4P-201ENST00000431302 1578 ntBASIC13.82□□□□□ -0.2
H3F3AP84243 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
H3F3AP84243 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
H3F3AP84243 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
H3F3AP84243 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
H3F3AP84243 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
H3F3AP84243 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.82□□□□□ -0.2
H3F3AP84243 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.82□□□□□ -0.2
H3F3AP84243 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
H3F3AP84243 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
H3F3AP84243 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
H3F3AP84243 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
H3F3AP84243 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
H3F3AP84243 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC13.82□□□□□ -0.2
H3F3AP84243 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC13.81□□□□□ -0.2
H3F3AP84243 MIR600HG-201ENST00000449175 5984 ntBASIC13.81□□□□□ -0.2
H3F3AP84243 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
H3F3AP84243 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
H3F3AP84243 INTS4P2-202ENST00000614726 2019 ntBASIC13.81□□□□□ -0.2
H3F3AP84243 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
H3F3AP84243 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
H3F3AP84243 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
H3F3AP84243 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
H3F3AP84243 AC023157.3-201ENST00000619086 2088 ntBASIC13.81□□□□□ -0.2
H3F3AP84243 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.81□□□□□ -0.2
H3F3AP84243 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.81□□□□□ -0.2
H3F3AP84243 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
H3F3AP84243 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
H3F3AP84243 AC067930.6-201ENST00000623257 4947 ntBASIC13.81□□□□□ -0.2
H3F3AP84243 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
H3F3AP84243 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
H3F3AP84243 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms