Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CENPFP49454 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CENPFP49454 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CENPFP49454 AL627422.1-201ENST00000434104 580 ntBASIC17.02■□□□□ 0.32
CENPFP49454 PFN2-206ENST00000461930 606 ntTSL 4 BASIC17.02■□□□□ 0.32
CENPFP49454 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC17.02■□□□□ 0.32
CENPFP49454 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC17.02■□□□□ 0.32
CENPFP49454 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC17.02■□□□□ 0.32
CENPFP49454 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CENPFP49454 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC17.02■□□□□ 0.32
CENPFP49454 MME-218ENST00000625667 363 ntTSL 5 BASIC17.02■□□□□ 0.32
CENPFP49454 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CENPFP49454 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC17.02■□□□□ 0.32
CENPFP49454 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CENPFP49454 RN7SKP175-201ENST00000408472 289 ntBASIC17.02■□□□□ 0.32
CENPFP49454 BRI3P1-201ENST00000440440 378 ntBASIC17.02■□□□□ 0.32
CENPFP49454 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC17.02■□□□□ 0.32
CENPFP49454 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC17.02■□□□□ 0.32
CENPFP49454 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.02■□□□□ 0.32
CENPFP49454 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CENPFP49454 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CENPFP49454 AC244394.1-201ENST00000435000 1665 ntBASIC17.02■□□□□ 0.31
CENPFP49454 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CENPFP49454 AC124067.4-201ENST00000519691 2379 ntBASIC17.02■□□□□ 0.31
CENPFP49454 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
CENPFP49454 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.02■□□□□ 0.31
CENPFP49454 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CENPFP49454 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
CENPFP49454 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CENPFP49454 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CENPFP49454 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
CENPFP49454 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC17.02■□□□□ 0.31
CENPFP49454 VDAC1P1-201ENST00000439229 848 ntBASIC17.02■□□□□ 0.31
CENPFP49454 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC17.02■□□□□ 0.31
CENPFP49454 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CENPFP49454 POU5F1P2-201ENST00000521750 823 ntBASIC17.02■□□□□ 0.31
CENPFP49454 MIR4313-201ENST00000580760 101 ntBASIC17.02■□□□□ 0.31
CENPFP49454 AL157813.1-201ENST00000612996 587 ntBASIC17.02■□□□□ 0.31
CENPFP49454 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CENPFP49454 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.01■□□□□ 0.31
CENPFP49454 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.01■□□□□ 0.31
CENPFP49454 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.01■□□□□ 0.31
CENPFP49454 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CENPFP49454 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CENPFP49454 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CENPFP49454 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CENPFP49454 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC17.01■□□□□ 0.31
CENPFP49454 RN7SL396P-201ENST00000471086 295 ntBASIC17.01■□□□□ 0.31
CENPFP49454 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC17.01■□□□□ 0.31
CENPFP49454 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CENPFP49454 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
CENPFP49454 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC17.01■□□□□ 0.31
CENPFP49454 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CENPFP49454 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CENPFP49454 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CENPFP49454 AL137783.1-201ENST00000623494 1896 ntBASIC17.01■□□□□ 0.31
CENPFP49454 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.01■□□□□ 0.31
CENPFP49454 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CENPFP49454 TUBB8P8-201ENST00000458717 1058 ntBASIC17.01■□□□□ 0.31
CENPFP49454 MRPL22P1-201ENST00000505398 616 ntBASIC17.01■□□□□ 0.31
CENPFP49454 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC17.01■□□□□ 0.31
CENPFP49454 CR383656.3-201ENST00000551315 183 ntBASIC17.01■□□□□ 0.31
CENPFP49454 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC17.01■□□□□ 0.31
CENPFP49454 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC17.01■□□□□ 0.31
CENPFP49454 AC008805.1-201ENST00000590892 364 ntBASIC17.01■□□□□ 0.31
CENPFP49454 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC17.01■□□□□ 0.31
CENPFP49454 CMC2-224ENST00000630396 481 ntTSL 5 BASIC17.01■□□□□ 0.31
CENPFP49454 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CENPFP49454 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CENPFP49454 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
CENPFP49454 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CENPFP49454 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.01■□□□□ 0.31
CENPFP49454 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CENPFP49454 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CENPFP49454 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
CENPFP49454 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CENPFP49454 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CENPFP49454 AL627231.1-201ENST00000394467 1125 ntBASIC17■□□□□ 0.31
CENPFP49454 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CENPFP49454 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC17■□□□□ 0.31
CENPFP49454 LYPLA2P1-203ENST00000447689 696 ntBASIC17■□□□□ 0.31
CENPFP49454 AC090857.1-201ENST00000527400 390 ntBASIC17■□□□□ 0.31
CENPFP49454 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC17■□□□□ 0.31
CENPFP49454 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17■□□□□ 0.31
CENPFP49454 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CENPFP49454 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17■□□□□ 0.31
CENPFP49454 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CENPFP49454 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CENPFP49454 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CENPFP49454 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17■□□□□ 0.31
CENPFP49454 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CENPFP49454 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CENPFP49454 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CENPFP49454 DUX4L47-201ENST00000566374 394 ntBASIC17■□□□□ 0.31
CENPFP49454 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CENPFP49454 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CENPFP49454 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CENPFP49454 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CENPFP49454 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CENPFP49454 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms