Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CTNNA1P35221 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTNNA1P35221 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CTNNA1P35221 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CTNNA1P35221 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CTNNA1P35221 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CTNNA1P35221 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTNNA1P35221 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.4■□□□□ 0.22
CTNNA1P35221 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.22
CTNNA1P35221 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CTNNA1P35221 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
CTNNA1P35221 KRT8P12-202ENST00000472924 1397 ntBASIC16.39■□□□□ 0.21
CTNNA1P35221 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
CTNNA1P35221 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTNNA1P35221 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CTNNA1P35221 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTNNA1P35221 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTNNA1P35221 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC16.39■□□□□ 0.21
CTNNA1P35221 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTNNA1P35221 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTNNA1P35221 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTNNA1P35221 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.39■□□□□ 0.21
CTNNA1P35221 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTNNA1P35221 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTNNA1P35221 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTNNA1P35221 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CTNNA1P35221 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTNNA1P35221 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CTNNA1P35221 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CTNNA1P35221 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.39■□□□□ 0.21
CTNNA1P35221 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.39■□□□□ 0.21
CTNNA1P35221 TARDBPP1-201ENST00000442013 1203 ntBASIC16.39■□□□□ 0.21
CTNNA1P35221 SPDYE14P-201ENST00000442619 822 ntBASIC16.39■□□□□ 0.21
CTNNA1P35221 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.39■□□□□ 0.21
CTNNA1P35221 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.39■□□□□ 0.21
CTNNA1P35221 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.39■□□□□ 0.21
CTNNA1P35221 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.39■□□□□ 0.21
CTNNA1P35221 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.39■□□□□ 0.21
CTNNA1P35221 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.39■□□□□ 0.21
CTNNA1P35221 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.39■□□□□ 0.21
CTNNA1P35221 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.39■□□□□ 0.21
CTNNA1P35221 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.39■□□□□ 0.21
CTNNA1P35221 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.39■□□□□ 0.21
CTNNA1P35221 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTNNA1P35221 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC16.39■□□□□ 0.21
CTNNA1P35221 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTNNA1P35221 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTNNA1P35221 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTNNA1P35221 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
CTNNA1P35221 AC007326.2-201ENST00000624224 7579 ntBASIC16.39■□□□□ 0.21
CTNNA1P35221 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CTNNA1P35221 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CTNNA1P35221 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CTNNA1P35221 R3HDM2P2-201ENST00000401880 2116 ntBASIC16.39■□□□□ 0.21
CTNNA1P35221 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.39■□□□□ 0.21
CTNNA1P35221 POLL-206ENST00000370172 2308 ntTSL 2 BASIC16.39■□□□□ 0.21
CTNNA1P35221 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTNNA1P35221 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTNNA1P35221 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTNNA1P35221 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CTNNA1P35221 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC16.38■□□□□ 0.21
CTNNA1P35221 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.38■□□□□ 0.21
CTNNA1P35221 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CTNNA1P35221 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CTNNA1P35221 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
CTNNA1P35221 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTNNA1P35221 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC16.38■□□□□ 0.21
CTNNA1P35221 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
CTNNA1P35221 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CTNNA1P35221 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTNNA1P35221 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.38■□□□□ 0.21
CTNNA1P35221 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTNNA1P35221 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTNNA1P35221 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTNNA1P35221 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC16.38■□□□□ 0.21
CTNNA1P35221 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC16.38■□□□□ 0.21
CTNNA1P35221 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CTNNA1P35221 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.38■□□□□ 0.21
CTNNA1P35221 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTNNA1P35221 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC16.38■□□□□ 0.21
CTNNA1P35221 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CTNNA1P35221 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTNNA1P35221 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.38■□□□□ 0.21
CTNNA1P35221 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.38■□□□□ 0.21
CTNNA1P35221 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
CTNNA1P35221 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC16.38■□□□□ 0.21
CTNNA1P35221 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
CTNNA1P35221 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTNNA1P35221 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.38■□□□□ 0.21
CTNNA1P35221 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.38■□□□□ 0.21
CTNNA1P35221 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.38■□□□□ 0.21
CTNNA1P35221 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.38■□□□□ 0.21
CTNNA1P35221 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTNNA1P35221 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.38■□□□□ 0.21
CTNNA1P35221 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTNNA1P35221 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.38■□□□□ 0.21
CTNNA1P35221 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
CTNNA1P35221 RN7SL828P-201ENST00000607615 303 ntBASIC16.38■□□□□ 0.21
CTNNA1P35221 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTNNA1P35221 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms