Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC16.23■□□□□ 0.19
MMP8P22894 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.23■□□□□ 0.19
MMP8P22894 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
MMP8P22894 BRI3BPP1-201ENST00000594224 787 ntBASIC16.23■□□□□ 0.19
MMP8P22894 AC107373.2-201ENST00000607735 490 ntBASIC16.23■□□□□ 0.19
MMP8P22894 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.23■□□□□ 0.19
MMP8P22894 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.23■□□□□ 0.19
MMP8P22894 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MMP8P22894 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MMP8P22894 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC16.23■□□□□ 0.19
MMP8P22894 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
MMP8P22894 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MMP8P22894 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
MMP8P22894 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.23■□□□□ 0.19
MMP8P22894 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.23■□□□□ 0.19
MMP8P22894 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
MMP8P22894 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MMP8P22894 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.23■□□□□ 0.19
MMP8P22894 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
MMP8P22894 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
MMP8P22894 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MMP8P22894 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC16.22■□□□□ 0.19
MMP8P22894 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
MMP8P22894 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MMP8P22894 AC093525.8-201ENST00000624099 1342 ntBASIC16.22■□□□□ 0.19
MMP8P22894 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
MMP8P22894 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MMP8P22894 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
MMP8P22894 AC007787.1-201ENST00000588095 1583 ntBASIC16.22■□□□□ 0.19
MMP8P22894 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MMP8P22894 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.22■□□□□ 0.19
MMP8P22894 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
MMP8P22894 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.22■□□□□ 0.19
MMP8P22894 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.22■□□□□ 0.19
MMP8P22894 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.22■□□□□ 0.19
MMP8P22894 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.22■□□□□ 0.19
MMP8P22894 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.22■□□□□ 0.19
MMP8P22894 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.22■□□□□ 0.19
MMP8P22894 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.22■□□□□ 0.19
MMP8P22894 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.22■□□□□ 0.19
MMP8P22894 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.22■□□□□ 0.19
MMP8P22894 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC16.22■□□□□ 0.19
MMP8P22894 MIR8072-201ENST00000614241 80 ntBASIC16.22■□□□□ 0.19
MMP8P22894 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.22■□□□□ 0.19
MMP8P22894 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.22■□□□□ 0.19
MMP8P22894 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
MMP8P22894 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
MMP8P22894 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MMP8P22894 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
MMP8P22894 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
MMP8P22894 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
MMP8P22894 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
MMP8P22894 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
MMP8P22894 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.21■□□□□ 0.19
MMP8P22894 AL360270.3-201ENST00000609118 1348 ntBASIC16.21■□□□□ 0.19
MMP8P22894 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.21■□□□□ 0.19
MMP8P22894 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
MMP8P22894 AL138799.1-201ENST00000448213 1675 ntBASIC16.21■□□□□ 0.19
MMP8P22894 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
MMP8P22894 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MMP8P22894 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
MMP8P22894 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
MMP8P22894 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MMP8P22894 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.21■□□□□ 0.19
MMP8P22894 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
MMP8P22894 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MMP8P22894 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
MMP8P22894 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MMP8P22894 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
MMP8P22894 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MMP8P22894 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.21■□□□□ 0.19
MMP8P22894 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MMP8P22894 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
MMP8P22894 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
MMP8P22894 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
MMP8P22894 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.21■□□□□ 0.19
MMP8P22894 MIR661-201ENST00000384842 89 ntBASIC16.21■□□□□ 0.19
MMP8P22894 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.21■□□□□ 0.19
MMP8P22894 DFFBP1-201ENST00000433250 979 ntBASIC16.21■□□□□ 0.19
MMP8P22894 AL353779.1-201ENST00000434793 351 ntBASIC16.21■□□□□ 0.19
MMP8P22894 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.21■□□□□ 0.19
MMP8P22894 TSPY16P-201ENST00000449843 468 ntBASIC16.21■□□□□ 0.19
MMP8P22894 VDAC1P7-201ENST00000462417 847 ntBASIC16.21■□□□□ 0.19
MMP8P22894 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.21■□□□□ 0.19
MMP8P22894 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
MMP8P22894 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.21■□□□□ 0.19
MMP8P22894 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.21■□□□□ 0.19
MMP8P22894 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
MMP8P22894 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
MMP8P22894 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
MMP8P22894 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
MMP8P22894 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.21■□□□□ 0.19
MMP8P22894 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MMP8P22894 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
MMP8P22894 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
MMP8P22894 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.21■□□□□ 0.18
MMP8P22894 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
MMP8P22894 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
MMP8P22894 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
MMP8P22894 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms