Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17■□□□□ 0.31
SMPD1P17405 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.99■□□□□ 0.31
SMPD1P17405 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SMPD1P17405 TUBBP5-203ENST00000508529 1334 ntBASIC16.99■□□□□ 0.31
SMPD1P17405 PRAL-201ENST00000624952 3286 ntBASIC16.99■□□□□ 0.31
SMPD1P17405 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.99■□□□□ 0.31
SMPD1P17405 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SMPD1P17405 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SMPD1P17405 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SMPD1P17405 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SMPD1P17405 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC16.99■□□□□ 0.31
SMPD1P17405 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SMPD1P17405 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
SMPD1P17405 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SMPD1P17405 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SMPD1P17405 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC16.99■□□□□ 0.31
SMPD1P17405 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SMPD1P17405 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC16.99■□□□□ 0.31
SMPD1P17405 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
SMPD1P17405 IMP3P2-201ENST00000489760 475 ntBASIC16.99■□□□□ 0.31
SMPD1P17405 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC16.99■□□□□ 0.31
SMPD1P17405 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC16.99■□□□□ 0.31
SMPD1P17405 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC16.99■□□□□ 0.31
SMPD1P17405 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
SMPD1P17405 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC16.99■□□□□ 0.31
SMPD1P17405 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC16.99■□□□□ 0.31
SMPD1P17405 RN7SL190P-201ENST00000582519 257 ntBASIC16.99■□□□□ 0.31
SMPD1P17405 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC16.99■□□□□ 0.31
SMPD1P17405 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC16.99■□□□□ 0.31
SMPD1P17405 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC16.99■□□□□ 0.31
SMPD1P17405 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC16.99■□□□□ 0.31
SMPD1P17405 AP001505.2-201ENST00000616815 443 ntBASIC16.99■□□□□ 0.31
SMPD1P17405 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC16.99■□□□□ 0.31
SMPD1P17405 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SMPD1P17405 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SMPD1P17405 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SMPD1P17405 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SMPD1P17405 CICP11-201ENST00000434745 2827 ntBASIC16.99■□□□□ 0.31
SMPD1P17405 KRT8P29-201ENST00000420409 1371 ntBASIC16.99■□□□□ 0.31
SMPD1P17405 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.99■□□□□ 0.31
SMPD1P17405 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SMPD1P17405 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
SMPD1P17405 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.99■□□□□ 0.31
SMPD1P17405 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SMPD1P17405 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMPD1P17405 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SMPD1P17405 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMPD1P17405 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMPD1P17405 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
SMPD1P17405 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
SMPD1P17405 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC16.98■□□□□ 0.31
SMPD1P17405 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
SMPD1P17405 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMPD1P17405 DPM3-202ENST00000368399 517 ntBASIC16.98■□□□□ 0.31
SMPD1P17405 MIR769-201ENST00000390225 118 ntBASIC16.98■□□□□ 0.31
SMPD1P17405 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMPD1P17405 CRCP-204ENST00000398684 492 ntTSL 2 BASIC16.98■□□□□ 0.31
SMPD1P17405 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC16.98■□□□□ 0.31
SMPD1P17405 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC16.98■□□□□ 0.31
SMPD1P17405 RNMTL1P1-201ENST00000454103 560 ntBASIC16.98■□□□□ 0.31
SMPD1P17405 RN7SL769P-201ENST00000469386 295 ntBASIC16.98■□□□□ 0.31
SMPD1P17405 AC021723.1-201ENST00000486306 515 ntBASIC16.98■□□□□ 0.31
SMPD1P17405 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMPD1P17405 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC16.98■□□□□ 0.31
SMPD1P17405 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC16.98■□□□□ 0.31
SMPD1P17405 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
SMPD1P17405 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC16.98■□□□□ 0.31
SMPD1P17405 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMPD1P17405 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC16.98■□□□□ 0.31
SMPD1P17405 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
SMPD1P17405 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
SMPD1P17405 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMPD1P17405 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMPD1P17405 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMPD1P17405 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMPD1P17405 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMPD1P17405 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.98■□□□□ 0.31
SMPD1P17405 AC105250.1-201ENST00000509378 2057 ntBASIC16.98■□□□□ 0.31
SMPD1P17405 KRT8P19-201ENST00000551916 1455 ntBASIC16.98■□□□□ 0.31
SMPD1P17405 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.98■□□□□ 0.31
SMPD1P17405 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMPD1P17405 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMPD1P17405 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMPD1P17405 PCDHB19P-201ENST00000570871 2371 ntBASIC16.97■□□□□ 0.31
SMPD1P17405 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SMPD1P17405 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC16.97■□□□□ 0.31
SMPD1P17405 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
SMPD1P17405 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.97■□□□□ 0.31
SMPD1P17405 AP000593.2-201ENST00000542775 1433 ntBASIC16.97■□□□□ 0.31
SMPD1P17405 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SMPD1P17405 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SMPD1P17405 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
SMPD1P17405 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.97■□□□□ 0.31
SMPD1P17405 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SMPD1P17405 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SMPD1P17405 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SMPD1P17405 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC16.97■□□□□ 0.31
SMPD1P17405 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SMPD1P17405 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SMPD1P17405 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms