Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC6P09630 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC6P09630 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC6P09630 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC6P09630 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC6P09630 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
HOXC6P09630 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.27■□□□□ 0.36
HOXC6P09630 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.27■□□□□ 0.36
HOXC6P09630 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.27■□□□□ 0.36
HOXC6P09630 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HOXC6P09630 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HOXC6P09630 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.27■□□□□ 0.36
HOXC6P09630 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
HOXC6P09630 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HOXC6P09630 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
HOXC6P09630 AC104457.1-201ENST00000401024 814 ntBASIC17.27■□□□□ 0.36
HOXC6P09630 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
HOXC6P09630 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC17.27■□□□□ 0.36
HOXC6P09630 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HOXC6P09630 OARD1-204ENST00000464633 717 ntTSL 2 BASIC17.27■□□□□ 0.36
HOXC6P09630 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HOXC6P09630 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
HOXC6P09630 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
HOXC6P09630 RN7SL574P-201ENST00000581512 297 ntBASIC17.27■□□□□ 0.36
HOXC6P09630 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC17.27■□□□□ 0.36
HOXC6P09630 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
HOXC6P09630 BNIP3P13-201ENST00000599968 566 ntBASIC17.27■□□□□ 0.36
HOXC6P09630 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC17.27■□□□□ 0.36
HOXC6P09630 SPCS2P2-201ENST00000603270 608 ntBASIC17.27■□□□□ 0.36
HOXC6P09630 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
HOXC6P09630 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HOXC6P09630 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
HOXC6P09630 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
HOXC6P09630 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC17.27■□□□□ 0.35
HOXC6P09630 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HOXC6P09630 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HOXC6P09630 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.27■□□□□ 0.35
HOXC6P09630 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC17.27■□□□□ 0.35
HOXC6P09630 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HOXC6P09630 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HOXC6P09630 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
HOXC6P09630 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
HOXC6P09630 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC17.26■□□□□ 0.35
HOXC6P09630 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
HOXC6P09630 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HOXC6P09630 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HOXC6P09630 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.26■□□□□ 0.35
HOXC6P09630 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
HOXC6P09630 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HOXC6P09630 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HOXC6P09630 CLUHP2-201ENST00000426660 1303 ntBASIC17.26■□□□□ 0.35
HOXC6P09630 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
HOXC6P09630 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.26■□□□□ 0.35
HOXC6P09630 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HOXC6P09630 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HOXC6P09630 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC17.26■□□□□ 0.35
HOXC6P09630 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC17.26■□□□□ 0.35
HOXC6P09630 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HOXC6P09630 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
HOXC6P09630 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
HOXC6P09630 PCDHA1-201ENST00000378133 2726 ntBASIC17.26■□□□□ 0.35
HOXC6P09630 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
HOXC6P09630 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HOXC6P09630 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
HOXC6P09630 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
HOXC6P09630 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC17.26■□□□□ 0.35
HOXC6P09630 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC17.26■□□□□ 0.35
HOXC6P09630 AC024681.1-201ENST00000521917 487 ntBASIC17.26■□□□□ 0.35
HOXC6P09630 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC17.26■□□□□ 0.35
HOXC6P09630 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC17.26■□□□□ 0.35
HOXC6P09630 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC17.26■□□□□ 0.35
HOXC6P09630 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC17.26■□□□□ 0.35
HOXC6P09630 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC17.26■□□□□ 0.35
HOXC6P09630 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC17.26■□□□□ 0.35
HOXC6P09630 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC17.26■□□□□ 0.35
HOXC6P09630 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HOXC6P09630 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HOXC6P09630 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HOXC6P09630 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HOXC6P09630 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
HOXC6P09630 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
HOXC6P09630 AC008132.1-202ENST00000342005 1389 ntBASIC17.26■□□□□ 0.35
HOXC6P09630 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HOXC6P09630 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HOXC6P09630 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.26■□□□□ 0.35
HOXC6P09630 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HOXC6P09630 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HOXC6P09630 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HOXC6P09630 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HOXC6P09630 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
HOXC6P09630 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HOXC6P09630 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HOXC6P09630 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HOXC6P09630 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
HOXC6P09630 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HOXC6P09630 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HOXC6P09630 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
HOXC6P09630 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
HOXC6P09630 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.25■□□□□ 0.35
HOXC6P09630 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms