Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
TPM3P06753 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.42■□□□□ 0.38
TPM3P06753 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.42■□□□□ 0.38
TPM3P06753 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.42■□□□□ 0.38
TPM3P06753 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
TPM3P06753 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
TPM3P06753 AC093909.1-201ENST00000504731 1122 ntBASIC17.42■□□□□ 0.38
TPM3P06753 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TPM3P06753 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.42■□□□□ 0.38
TPM3P06753 AL773604.1-201ENST00000617417 272 ntBASIC17.42■□□□□ 0.38
TPM3P06753 AC148477.8-201ENST00000624298 468 ntBASIC17.42■□□□□ 0.38
TPM3P06753 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.42■□□□□ 0.38
TPM3P06753 INTS4P1-203ENST00000641008 3683 ntBASIC17.42■□□□□ 0.38
TPM3P06753 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TPM3P06753 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
TPM3P06753 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TPM3P06753 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TPM3P06753 USP35-204ENST00000530267 2419 ntTSL 2 BASIC17.42■□□□□ 0.38
TPM3P06753 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TPM3P06753 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TPM3P06753 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC17.42■□□□□ 0.38
TPM3P06753 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
TPM3P06753 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
TPM3P06753 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TPM3P06753 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC17.41■□□□□ 0.38
TPM3P06753 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TPM3P06753 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TPM3P06753 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TPM3P06753 ACE3P-201ENST00000423435 1973 ntBASIC17.41■□□□□ 0.38
TPM3P06753 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TPM3P06753 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TPM3P06753 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TPM3P06753 RPS8P6-201ENST00000426177 609 ntBASIC17.41■□□□□ 0.38
TPM3P06753 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.41■□□□□ 0.38
TPM3P06753 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.41■□□□□ 0.38
TPM3P06753 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
TPM3P06753 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TPM3P06753 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TPM3P06753 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TPM3P06753 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.41■□□□□ 0.38
TPM3P06753 BCAR1-209ENST00000546196 1340 ntBASIC17.41■□□□□ 0.38
TPM3P06753 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC17.41■□□□□ 0.38
TPM3P06753 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TPM3P06753 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TPM3P06753 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC17.41■□□□□ 0.38
TPM3P06753 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TPM3P06753 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
TPM3P06753 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.41■□□□□ 0.38
TPM3P06753 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TPM3P06753 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC17.41■□□□□ 0.38
TPM3P06753 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC17.41■□□□□ 0.38
TPM3P06753 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TPM3P06753 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TPM3P06753 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
TPM3P06753 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
TPM3P06753 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC17.4■□□□□ 0.38
TPM3P06753 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TPM3P06753 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TPM3P06753 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
TPM3P06753 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TPM3P06753 AC025580.3-201ENST00000617932 1424 ntBASIC17.4■□□□□ 0.38
TPM3P06753 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TPM3P06753 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TPM3P06753 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TPM3P06753 AC002056.1-201ENST00000395613 760 ntBASIC17.4■□□□□ 0.38
TPM3P06753 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TPM3P06753 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.4■□□□□ 0.38
TPM3P06753 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.4■□□□□ 0.38
TPM3P06753 EMBP1-201ENST00000458200 901 ntBASIC17.4■□□□□ 0.38
TPM3P06753 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TPM3P06753 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.4■□□□□ 0.38
TPM3P06753 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TPM3P06753 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.4■□□□□ 0.38
TPM3P06753 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
TPM3P06753 AL031008.1-201ENST00000619963 541 ntBASIC17.4■□□□□ 0.38
TPM3P06753 AC012313.10-201ENST00000623509 926 ntBASIC17.4■□□□□ 0.38
TPM3P06753 AC113367.3-201ENST00000508316 1912 ntBASIC17.4■□□□□ 0.38
TPM3P06753 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TPM3P06753 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC17.4■□□□□ 0.38
TPM3P06753 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TPM3P06753 PCDHGB8P-201ENST00000502926 1973 ntBASIC17.4■□□□□ 0.38
TPM3P06753 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.4■□□□□ 0.38
TPM3P06753 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TPM3P06753 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TPM3P06753 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
TPM3P06753 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TPM3P06753 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TPM3P06753 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC17.4■□□□□ 0.38
TPM3P06753 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.4■□□□□ 0.38
TPM3P06753 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TPM3P06753 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
TPM3P06753 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.38
TPM3P06753 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
TPM3P06753 ADAMTS7P1-201ENST00000613213 4793 ntBASIC17.39■□□□□ 0.37
TPM3P06753 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TPM3P06753 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TPM3P06753 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC17.39■□□□□ 0.37
TPM3P06753 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC17.39■□□□□ 0.37
TPM3P06753 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.39■□□□□ 0.37
TPM3P06753 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms