Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 MIR4259-201ENST00000584466 101 ntBASIC18.37■□□□□ 0.53
MBD4O95243 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC18.37■□□□□ 0.53
MBD4O95243 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MBD4O95243 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MBD4O95243 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
MBD4O95243 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
MBD4O95243 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MBD4O95243 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MBD4O95243 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MBD4O95243 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MBD4O95243 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
MBD4O95243 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MBD4O95243 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
MBD4O95243 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
MBD4O95243 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC18.37■□□□□ 0.53
MBD4O95243 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MBD4O95243 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC18.37■□□□□ 0.53
MBD4O95243 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC18.37■□□□□ 0.53
MBD4O95243 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC18.37■□□□□ 0.53
MBD4O95243 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MBD4O95243 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC18.37■□□□□ 0.53
MBD4O95243 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MBD4O95243 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MBD4O95243 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC18.37■□□□□ 0.53
MBD4O95243 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC18.37■□□□□ 0.53
MBD4O95243 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
MBD4O95243 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MBD4O95243 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MBD4O95243 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
MBD4O95243 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
MBD4O95243 CASK-202ENST00000378158 3848 ntTSL 5 BASIC18.36■□□□□ 0.53
MBD4O95243 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MBD4O95243 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
MBD4O95243 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
MBD4O95243 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
MBD4O95243 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC18.36■□□□□ 0.53
MBD4O95243 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC18.36■□□□□ 0.53
MBD4O95243 BOLA2P3-201ENST00000404566 256 ntBASIC18.36■□□□□ 0.53
MBD4O95243 AL139094.1-201ENST00000405549 1188 ntBASIC18.36■□□□□ 0.53
MBD4O95243 USB1-202ENST00000423271 1217 ntTSL 2 BASIC18.36■□□□□ 0.53
MBD4O95243 NUS1P3-201ENST00000423502 862 ntBASIC18.36■□□□□ 0.53
MBD4O95243 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
MBD4O95243 KRT8P44-201ENST00000441609 1350 ntBASIC18.36■□□□□ 0.53
MBD4O95243 MST1L-201ENST00000442552 2185 ntBASIC18.36■□□□□ 0.53
MBD4O95243 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC18.36■□□□□ 0.53
MBD4O95243 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
MBD4O95243 ZBTB45P1-201ENST00000452761 1456 ntBASIC18.36■□□□□ 0.53
MBD4O95243 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC18.36■□□□□ 0.53
MBD4O95243 AC007551.1-201ENST00000457394 519 ntBASIC18.36■□□□□ 0.53
MBD4O95243 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MBD4O95243 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC18.36■□□□□ 0.53
MBD4O95243 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC18.36■□□□□ 0.53
MBD4O95243 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
MBD4O95243 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MBD4O95243 MIR6805-201ENST00000615055 62 ntBASIC18.36■□□□□ 0.53
MBD4O95243 AC145423.3-201ENST00000615987 467 ntBASIC18.36■□□□□ 0.53
MBD4O95243 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
MBD4O95243 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC18.36■□□□□ 0.53
MBD4O95243 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MBD4O95243 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MBD4O95243 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
MBD4O95243 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
MBD4O95243 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
MBD4O95243 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
MBD4O95243 SLC9A7P1-202ENST00000556476 2239 ntBASIC18.35■□□□□ 0.53
MBD4O95243 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MBD4O95243 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MBD4O95243 AC023024.2-201ENST00000623561 1993 ntBASIC18.35■□□□□ 0.53
MBD4O95243 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
MBD4O95243 REXO1L4P-201ENST00000605109 1937 ntBASIC18.35■□□□□ 0.53
MBD4O95243 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MBD4O95243 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MBD4O95243 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MBD4O95243 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
MBD4O95243 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MBD4O95243 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
MBD4O95243 ACTBP8-201ENST00000403258 1108 ntBASIC18.35■□□□□ 0.53
MBD4O95243 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MBD4O95243 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
MBD4O95243 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC18.35■□□□□ 0.53
MBD4O95243 AC114812.1-204ENST00000449669 728 ntBASIC18.35■□□□□ 0.53
MBD4O95243 CTBP2P5-201ENST00000454986 1264 ntBASIC18.35■□□□□ 0.53
MBD4O95243 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC18.35■□□□□ 0.53
MBD4O95243 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC18.35■□□□□ 0.53
MBD4O95243 RPS24-214ENST00000613865 538 ntTSL 5 BASIC18.35■□□□□ 0.53
MBD4O95243 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MBD4O95243 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MBD4O95243 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC18.35■□□□□ 0.53
MBD4O95243 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MBD4O95243 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
MBD4O95243 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MBD4O95243 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
MBD4O95243 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MBD4O95243 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MBD4O95243 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MBD4O95243 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC18.34■□□□□ 0.53
MBD4O95243 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
MBD4O95243 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
MBD4O95243 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MBD4O95243 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms