Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
BEST1O76090 AL109954.1-202ENST00000564051 2148 ntBASIC16.15■□□□□ 0.18
BEST1O76090 AP000845.1-201ENST00000581677 2131 ntBASIC16.15■□□□□ 0.18
BEST1O76090 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
BEST1O76090 AC046158.3-201ENST00000624947 2558 ntBASIC16.15■□□□□ 0.18
BEST1O76090 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
BEST1O76090 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BEST1O76090 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
BEST1O76090 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
BEST1O76090 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BEST1O76090 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
BEST1O76090 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC16.15■□□□□ 0.18
BEST1O76090 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC16.15■□□□□ 0.18
BEST1O76090 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
BEST1O76090 FTH1P14-201ENST00000482930 551 ntBASIC16.15■□□□□ 0.18
BEST1O76090 IGHV3-71-201ENST00000523324 359 ntBASIC16.15■□□□□ 0.18
BEST1O76090 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.15■□□□□ 0.18
BEST1O76090 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC16.15■□□□□ 0.18
BEST1O76090 MIR4259-201ENST00000584466 101 ntBASIC16.15■□□□□ 0.18
BEST1O76090 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
BEST1O76090 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC16.15■□□□□ 0.18
BEST1O76090 AC244669.2-201ENST00000612320 853 ntBASIC16.15■□□□□ 0.18
BEST1O76090 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.15■□□□□ 0.18
BEST1O76090 AC145423.3-201ENST00000615987 467 ntBASIC16.15■□□□□ 0.18
BEST1O76090 MIR6775-201ENST00000617557 69 ntBASIC16.15■□□□□ 0.18
BEST1O76090 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC16.15■□□□□ 0.18
BEST1O76090 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.15■□□□□ 0.18
BEST1O76090 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.15■□□□□ 0.18
BEST1O76090 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
BEST1O76090 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
BEST1O76090 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
BEST1O76090 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
BEST1O76090 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
BEST1O76090 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BEST1O76090 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BEST1O76090 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BEST1O76090 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
BEST1O76090 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BEST1O76090 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.18
BEST1O76090 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.14■□□□□ 0.18
BEST1O76090 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.18
BEST1O76090 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.18
BEST1O76090 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
BEST1O76090 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
BEST1O76090 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
BEST1O76090 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
BEST1O76090 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
BEST1O76090 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.14■□□□□ 0.17
BEST1O76090 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
BEST1O76090 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
BEST1O76090 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
BEST1O76090 AC022532.1-201ENST00000624563 1728 ntBASIC16.14■□□□□ 0.17
BEST1O76090 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
BEST1O76090 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
BEST1O76090 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
BEST1O76090 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
BEST1O76090 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
BEST1O76090 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
BEST1O76090 AL139094.1-201ENST00000405549 1188 ntBASIC16.14■□□□□ 0.17
BEST1O76090 HLA-K-203ENST00000430151 1046 ntBASIC16.14■□□□□ 0.17
BEST1O76090 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
BEST1O76090 AL355864.2-201ENST00000447420 863 ntBASIC16.14■□□□□ 0.17
BEST1O76090 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC16.14■□□□□ 0.17
BEST1O76090 AC114812.1-204ENST00000449669 728 ntBASIC16.14■□□□□ 0.17
BEST1O76090 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
BEST1O76090 AC119751.2-201ENST00000504529 210 ntBASIC16.14■□□□□ 0.17
BEST1O76090 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC16.14■□□□□ 0.17
BEST1O76090 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC16.14■□□□□ 0.17
BEST1O76090 IFT20-216ENST00000588477 774 ntTSL 5 BASIC16.14■□□□□ 0.17
BEST1O76090 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC16.14■□□□□ 0.17
BEST1O76090 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC16.14■□□□□ 0.17
BEST1O76090 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
BEST1O76090 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
BEST1O76090 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
BEST1O76090 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.14■□□□□ 0.17
BEST1O76090 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
BEST1O76090 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
BEST1O76090 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC16.14■□□□□ 0.17
BEST1O76090 KRT8P35-201ENST00000483942 1338 ntBASIC16.14■□□□□ 0.17
BEST1O76090 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
BEST1O76090 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
BEST1O76090 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
BEST1O76090 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
BEST1O76090 PDIA3P1-201ENST00000471856 1510 ntBASIC16.14■□□□□ 0.17
BEST1O76090 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
BEST1O76090 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.14■□□□□ 0.17
BEST1O76090 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.14■□□□□ 0.17
BEST1O76090 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
BEST1O76090 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
BEST1O76090 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
BEST1O76090 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
BEST1O76090 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
BEST1O76090 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
BEST1O76090 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
BEST1O76090 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
BEST1O76090 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC16.13■□□□□ 0.17
BEST1O76090 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
BEST1O76090 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
BEST1O76090 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
BEST1O76090 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms