Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV5-4A0A0C4DH59 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV5-4A0A0C4DH59 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TRBV5-4A0A0C4DH59 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.15■□□□□ 0.02
TRBV5-4A0A0C4DH59 AL157414.3-201ENST00000624276 1954 ntBASIC15.15■□□□□ 0.02
TRBV5-4A0A0C4DH59 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV5-4A0A0C4DH59 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
TRBV5-4A0A0C4DH59 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV5-4A0A0C4DH59 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV5-4A0A0C4DH59 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV5-4A0A0C4DH59 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV5-4A0A0C4DH59 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV5-4A0A0C4DH59 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV5-4A0A0C4DH59 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.14■□□□□ 0.01
TRBV5-4A0A0C4DH59 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV5-4A0A0C4DH59 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV5-4A0A0C4DH59 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
TRBV5-4A0A0C4DH59 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV5-4A0A0C4DH59 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV5-4A0A0C4DH59 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV5-4A0A0C4DH59 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.14■□□□□ 0.01
TRBV5-4A0A0C4DH59 RNU1-114P-201ENST00000365297 166 ntBASIC15.14■□□□□ 0.01
TRBV5-4A0A0C4DH59 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV5-4A0A0C4DH59 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV5-4A0A0C4DH59 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC15.14■□□□□ 0.01
TRBV5-4A0A0C4DH59 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.14■□□□□ 0.01
TRBV5-4A0A0C4DH59 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.14■□□□□ 0.01
TRBV5-4A0A0C4DH59 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.14■□□□□ 0.01
TRBV5-4A0A0C4DH59 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV5-4A0A0C4DH59 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV5-4A0A0C4DH59 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
TRBV5-4A0A0C4DH59 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV5-4A0A0C4DH59 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15.14■□□□□ 0.01
TRBV5-4A0A0C4DH59 AP005019.2-201ENST00000615104 511 ntBASIC15.14■□□□□ 0.01
TRBV5-4A0A0C4DH59 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV5-4A0A0C4DH59 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV5-4A0A0C4DH59 KRT8P14-201ENST00000414254 1442 ntBASIC15.14■□□□□ 0.01
TRBV5-4A0A0C4DH59 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
TRBV5-4A0A0C4DH59 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
TRBV5-4A0A0C4DH59 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV5-4A0A0C4DH59 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV5-4A0A0C4DH59 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV5-4A0A0C4DH59 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV5-4A0A0C4DH59 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV5-4A0A0C4DH59 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.14■□□□□ 0.01
TRBV5-4A0A0C4DH59 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV5-4A0A0C4DH59 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.14■□□□□ 0.01
TRBV5-4A0A0C4DH59 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV5-4A0A0C4DH59 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.14■□□□□ 0.01
TRBV5-4A0A0C4DH59 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV5-4A0A0C4DH59 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV5-4A0A0C4DH59 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV5-4A0A0C4DH59 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.14■□□□□ 0.01
TRBV5-4A0A0C4DH59 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
TRBV5-4A0A0C4DH59 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.14■□□□□ 0.01
TRBV5-4A0A0C4DH59 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV5-4A0A0C4DH59 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
TRBV5-4A0A0C4DH59 REXO1L5P-201ENST00000622260 2098 ntBASIC15.13■□□□□ 0.01
TRBV5-4A0A0C4DH59 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV5-4A0A0C4DH59 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV5-4A0A0C4DH59 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV5-4A0A0C4DH59 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV5-4A0A0C4DH59 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.13■□□□□ 0.01
TRBV5-4A0A0C4DH59 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV5-4A0A0C4DH59 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV5-4A0A0C4DH59 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.13■□□□□ 0.01
TRBV5-4A0A0C4DH59 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TRBV5-4A0A0C4DH59 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
TRBV5-4A0A0C4DH59 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV5-4A0A0C4DH59 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV5-4A0A0C4DH59 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV5-4A0A0C4DH59 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.13■□□□□ 0.01
TRBV5-4A0A0C4DH59 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.13■□□□□ 0.01
TRBV5-4A0A0C4DH59 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.13■□□□□ 0.01
TRBV5-4A0A0C4DH59 AP006294.1-201ENST00000415407 339 ntBASIC15.13■□□□□ 0.01
TRBV5-4A0A0C4DH59 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.13■□□□□ 0.01
TRBV5-4A0A0C4DH59 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.13■□□□□ 0.01
TRBV5-4A0A0C4DH59 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV5-4A0A0C4DH59 AC022137.2-201ENST00000503482 481 ntBASIC15.13■□□□□ 0.01
TRBV5-4A0A0C4DH59 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV5-4A0A0C4DH59 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV5-4A0A0C4DH59 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV5-4A0A0C4DH59 DUX4L47-201ENST00000566374 394 ntBASIC15.13■□□□□ 0.01
TRBV5-4A0A0C4DH59 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.13■□□□□ 0.01
TRBV5-4A0A0C4DH59 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.13■□□□□ 0.01
TRBV5-4A0A0C4DH59 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
TRBV5-4A0A0C4DH59 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.13■□□□□ 0.01
TRBV5-4A0A0C4DH59 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV5-4A0A0C4DH59 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV5-4A0A0C4DH59 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.13■□□□□ 0.01
TRBV5-4A0A0C4DH59 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV5-4A0A0C4DH59 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV5-4A0A0C4DH59 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV5-4A0A0C4DH59 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.13■□□□□ 0.01
TRBV5-4A0A0C4DH59 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
TRBV5-4A0A0C4DH59 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV5-4A0A0C4DH59 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV5-4A0A0C4DH59 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.13■□□□□ 0.01
TRBV5-4A0A0C4DH59 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRBV5-4A0A0C4DH59 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms